Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1898 ATGGAGAGCATTGAAATTAGCATTCCTACTAAACCTGAGCTGCATGAGAGTGGCACGAAATCTGGAGCCAACAAAGCTTGGCTTCGAGATCAGATTCAGAGTGTATGGGATTTTTGCAAGGAAGACACTGGTAGAGAAATATTTGCACTCAAAGCTGGGCTGGCTGTTCTTCTTGTGTCTTTGCTTATATTATTTGAAGCCCTATGCCAAGTCTTTGGGCCAAATATTGTATGGGCCATTCTCACTGCTGTCCTTGTATTCGAAGACACTGTTGGAGCAACGTTTAATCGAGGATTTAATCGAGCACTGGGAACCTTGGTGGCGGGAATCTTGGCCATTGTTGTTGCTGAGACAGCACTATCCTGTGGCCATGTCGCTGAGCCTATTATCATTGGCCTTAGTATTTTCATGATCGCCGTCATAACTTCGTACATGAAAACTTGGCCACCGCTTGTGCAGTATGAGTACGGGTTTAGGGTGGCACTGCTAACCTATTGCTTGATCATAGTTTCTGACTATCGAATGGGAAATCCAATTAGAACTATGTTCGATCGGTTGTATTCCATCGCCATTGGAGGAATAATATCAATGTTGGTCAATGTCTCTATTTTTCCTCTATGGGCTGGGGACCAGTTACATAAAGAATTGGTCAAAAACTTTCATTCAGTGGCAGATTCACTTGAGGAATGTGTCAAGAAATATTTAGAAGATGTACCAGAGAAGTCTAAAGTCACCATGGCTAGCATAGATGCATTTCCAGACGAACCGGCTTATAAGAGATGTCAAAGCAGCTTGAATTCAGGGTCAAAGCTTGAGACTCTGGCAAAATCAGCAAAATGGGAACCACCACATGGTAGATTCATGCACATTTCATATCCATGGGCACAATATGTTAATGTTGGGGCAGTCTTGCGATACTGTGCTTATGAAGTTATGGCACTCCATAGCATTGTACACGCTGAAATTCAGGTACCCTACAAATTGCGGGTTGTGTTCCAAACTGAAATCCAAGAGGCATCAAACCAAGCTGCAGAGATAGTAAGGATTTTGGGAAGAGACATTAGCCGCATGGAGTGGAGTCTGAAAAATTCCCATATTAACAGGCTTCATAGCTCTATTAAGAGGCTGCAACGTTCTATGTACTTCCAATATTCTTATCTACTGACATCCACTTTTGAACCCCCTATCCTTGATAACTCTTCAAAGTCCTTTGCAAACAATATTTCACATATCTTCTACCATTTACCGTATCAAAGGGAGATGGCAGAACAAGTAGAATGTTATCATGAGATAACGAGGAAGCAGTTGAAAAGACTATATTCTTGGCCACCTAGAGAAGTGGATGCTTTTGAAGAAGATAGTGAGAAAAACATTAAGTTGTTAGCTGGGGAGAGAAAGGCGAAAGCCTTAGAGAGTACTGCAATTTTGTCATTGACTAACTTCGCTTTCTCGCTCGTGGAGTTTGTGGCAAGAGTTGACCATTTGATAGAGGCAGTTGATAAGCTTTCCAAGATGGCCAAGTTCAAGCCTAACGATGGGTTATAG 1545 0.422 MESIEISIPTKPELHESGTKSGANKAWLRDQIQSVWDFCKEDTGREIFALKAGLAVLLVSLLILFEALCQVFGPNIVWAILTAVLVFEDTVGATFNRGFNRALGTLVAGILAIVVAETALSCGHVAEPIIIGLSIFMIAVITSYMKTWPPLVQYEYGFRVALLTYCLIIVSDYRMGNPIRTMFDRLYSIAIGGIISMLVNVSIFPLWAGDQLHKELVKNFHSVADSLEECVKKYLEDVPEKSKVTMASIDAFPDEPAYKRCQSSLNSGSKLETLAKSAKWEPPHGRFMHISYPWAQYVNVGAVLRYCAYEVMALHSIVHAEIQVPYKLRVVFQTEIQEASNQAAEIVRILGRDISRMEWSLKNSHINRLHSSIKRLQRSMYFQYSYLLTSTFEPPILDNSSKSFANNISHIFYHLPYQREMAEQVECYHEITRKQLKRLYSWPPREVDAFEEDSEKNIKLLAGERKAKALESTAILSLTNFAFSLVEFVARVDHLIEAVDKLSKMAKFKPNDGL* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1898 514 Pfam Aluminium activated malate transporter 36 503 IPR020966 GO:0015743
Gso1g1898 514 MobiDBLite consensus disorder prediction 1 20 - -
Gso1g1898 514 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 3 511 - -
Gso1g1898 514 PANTHER OS01G0221600 PROTEIN 3 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1898 Gso-Chr1 55709052 55712067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1898 29 509 Miscellaneous Gene Families AT3G18440 36.739 3.48e-93 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1898 - - gmx:102668657 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1898 1 55709052 55712067 Gso1g1898 1 55709052 55712067 ECH