Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1892 ATGAACGGTGCTCCCAAGCACGAACGCCGCTGGGCGTCCGACACCGTGCCGGAGATGGCATTCGTCAGCGCCGGGACTTCGCCGGGAACTGAGTACAACTCCGTCACCGACGAGTACGTTGAGGTCACTCTCGATGTTCACGACGATCACACCATCGTTCTCCGCGACGTTGAGCCGGTGACTGTCGTTAACATCGACGACGGCGTCGCAACAAGTGGAAACGAAACTCCGACGTCCTCCGCGTGGTCGCCGTCGATCAGGAGGAGCTCTCCTAACCGGTGGCGGCAGTTCTCGCAGGAGCTGAAGGCCGAGGCGGTTGCGAAGGCGAGGCAGTTTTCGCAGGAGCTCAAGGCGGAGCTGCGGTGGTTCTCGTGGAGCCAAGGCGGATCTGAAACGGCGTTGGTGGCTCGAGATCTCAGGAAGCAGCGCGCTCAGCTTGACCGCAACCGCTCCGGTACGAAGAAAGCGCTCCGTGGACTGAAATTTATTAGCAGTAAATCCAATGGCGCTGACGCCTGGAACGAGGTGCAAAGCAATTTCTATAGTCTTGCCAAGGACGGTTATCTTTATCGCACTGATTTTGCGCAATGCATAGGGATGAAGGACTCTAAGGAGTTCGCTCTGGAACTATTTGACGCGCTGAGTCGTAGACGTAGACTGAAGGTTGAAAAGATCAGCAGAGACGAGCTTAACGAATTCTGGTCGCAAATTACCGATCAAAGCTTTGATTCGCGGCTTCAGATATTCTTTGACATGGTGGACAAGAATGAAGATGGTAGGATCACCGAAGAAGAAGTGAAAGAGATCATTATGCTAAGCGCTTCAGCAAATAAATTATCCAGATTGAAAGAGCAGGCCGAGGAATACGCAGCTCTGATCATGGAAGAGTTAGACCCTGAAAGACTTGGCTACATCGAGCTATGGCAACTGGAGACGCTTCTGTTACAAAAGGACACGTATCTCAACTACAGCCAAGCACTAAGCTACACCAGTCAAGCTTTGAGCCAGAACCTACAAGGACTAAGGGCGAGAAGTCCGATACGTAGGATGAGCCGCAGAATGCTGTACTATTTGCAAGAAAATTGGAGGAGACTTTGGATTTTAGCATTGTGGATTTCTGCTATGATTGGGCTGTTTACGTGGAAGTTCATCGAGTACAAGAGGAAAAATGCTTATCATATCATGGGTTACTGTCTTCTCGCGGCCAAAGGTGCTGCTGAGACTCTGAAGTTCAACATGGCACTTATACTCTTGCCCGTCTGCAGAAATACCATAACTTGGCTCAGGTCCACCAAGTTGGCTTACATTGCACCTTTCGATGATAACATCAACTTTCATAAGACAATTGCTGCGGCAGTAGTGATTGGTGTTATACTTCATGCCGGGAATCACCTTGCTTGTGATTTTCCTAGACTTGTAAATTCGTCTGAAAAAGATTATGAGACGTATTTGGATGGCGTATTTGGTGATCATAAACCCAGTTACGGAGACCTCATTAAAGGGGTTGAGGGTGTGACAGGAATTCTGATGGTGATTTTGATGGCAATAGCATTTACTCTTGCAACAAAATGGTTCAGGAGAAATCTCGTTAAGCTTCCTAAACCGTTTAATAGGCTCACTGGTTTCAATGCGTTCTGGTATTCTCACCATCTATTTGTGATTGTTTATGTCCTGCTCACTATTCATGGTGTATATCTTTACCTCGAGCGCAGATGGCACCTTCAAACGACATGGATGTATCTTGCCGTTCCAATTTTACTTTATGCCGGGGAAAGAACGCTAAGATTCTTCCGTTCTGGTTTCTATACAGTCCGTCTAATAAAGGTTGCCATTTATCCTGGAAATGTTCTGACATTGCAAATGTCAAAGCCGTCTCAATTTCGATACAAGAGCGGACAATACATGTTTGTGCAATGTCCTGCTGTTTCTCCATTTGAGTGGCATCCGTTTTCAATTACCTCTGCCCCTGATGATGACTACCTGAGTGTTCACATACGGCAACTGGGAGATTGGACACAGGAGCTCAAAAGGGTATTCTCTGCGGCCTGTGAGCCTCCCTTAGCTGGGAAGAGCGGGCTTCTCAGGGCTGATGAAACCACCAAGAAATGCTTACCAAAGTTAAGGATAGATGGACCTTACGGTGCGCCAGCACAAGACTACAGAAACTATGATGTCCTGCTACTTGTCGGTCTCGGGATAGGAGCAACACCTTTTATCAGCATTCTGAAAGATCTTCTCAACAATATCATCAAAATGGAGGAGCTGGCGGATTCAGTCTCTGATTCAAGTAGAGGTTCAGACCTTAGCACTGGGAGCGCAGATTCACTATCTTCTAATAAGATTTCTCCTAAACGGAAGAAGACACTGAAGACTACCAACGCATATTTCTACTGGGTAACAAGAGAACAAGGTTCTTTCGATTGGTTTAAAGGGGTCATGAATGAAGTTGCTGAACTTGATCAAAGGGGCGTTATTGAGATGCACAACTACTTAACTAGCGTATATGAGGAAGGAGATGCCAGATCCGCCCTCATTACAATGGTGCAAGCCCTCAACCACGCAAAAAATGGAGTTGATATTGTTTCCGGGACTAGGCTGAGAACTCATTTTGCTAAGCCTAACTGGAAGAAAGTTTTCTCTAGAATATGCTCTAAGCACTGCAATGGACGAATAGGGGTTTTCTATTGTGGCGCACCGGTTTTGGCAAAAGAATTAAGCAAGCTCTGCTTCGAGTTCAACGAAAAAGGTCAAACAAAATTTGAGTTCCACAAGGAGCATTTCTAA 2784 0.4684 MNGAPKHERRWASDTVPEMAFVSAGTSPGTEYNSVTDEYVEVTLDVHDDHTIVLRDVEPVTVVNIDDGVATSGNETPTSSAWSPSIRRSSPNRWRQFSQELKAEAVAKARQFSQELKAELRWFSWSQGGSETALVARDLRKQRAQLDRNRSGTKKALRGLKFISSKSNGADAWNEVQSNFYSLAKDGYLYRTDFAQCIGMKDSKEFALELFDALSRRRRLKVEKISRDELNEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRARSPIRRMSRRMLYYLQENWRRLWILALWISAMIGLFTWKFIEYKRKNAYHIMGYCLLAAKGAAETLKFNMALILLPVCRNTITWLRSTKLAYIAPFDDNINFHKTIAAAVVIGVILHAGNHLACDFPRLVNSSEKDYETYLDGVFGDHKPSYGDLIKGVEGVTGILMVILMAIAFTLATKWFRRNLVKLPKPFNRLTGFNAFWYSHHLFVIVYVLLTIHGVYLYLERRWHLQTTWMYLAVPILLYAGERTLRFFRSGFYTVRLIKVAIYPGNVLTLQMSKPSQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPDDDYLSVHIRQLGDWTQELKRVFSAACEPPLAGKSGLLRADETTKKCLPKLRIDGPYGAPAQDYRNYDVLLLVGLGIGATPFISILKDLLNNIIKMEELADSVSDSSRGSDLSTGSADSLSSNKISPKRKKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRLRTHFAKPNWKKVFSRICSKHCNGRIGVFYCGAPVLAKELSKLCFEFNEKGQTKFEFHKEHF* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1892 927 PANTHER RESPIRATORY BURST OXIDASE2 28 927 - -
Gso1g1892 927 SUPERFAMILY EF-hand 173 323 IPR011992 -
Gso1g1892 927 MobiDBLite consensus disorder prediction 68 89 - -
Gso1g1892 927 CDD EFh 224 271 IPR002048 GO:0005509
Gso1g1892 927 CDD NOX_Duox_like_FAD_NADP 606 927 - -
Gso1g1892 927 ProSitePatterns EF-hand calcium-binding domain. 254 266 IPR018247 -
Gso1g1892 927 Gene3D Translation factors 591 682 - -
Gso1g1892 927 Pfam FAD-binding domain 602 716 IPR013112 GO:0016491
Gso1g1892 927 MobiDBLite consensus disorder prediction 760 779 - -
Gso1g1892 927 Pfam Ferric reductase like transmembrane component 404 559 IPR013130 -
Gso1g1892 927 ProSiteProfiles EF-hand calcium-binding domain profile. 241 276 IPR002048 GO:0005509
Gso1g1892 927 Pfam Ferric reductase NAD binding domain 723 909 IPR013121 GO:0016491
Gso1g1892 927 PRINTS Cytochrome B-245 heavy chain signature 505 528 IPR000778 GO:0016020|GO:0016491
Gso1g1892 927 PRINTS Cytochrome B-245 heavy chain signature 705 718 IPR000778 GO:0016020|GO:0016491
Gso1g1892 927 PRINTS Cytochrome B-245 heavy chain signature 728 745 IPR000778 GO:0016020|GO:0016491
Gso1g1892 927 Coils Coil 272 292 - -
Gso1g1892 927 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 599 719 IPR017927 GO:0016491
Gso1g1892 927 SUPERFAMILY Riboflavin synthase domain-like 602 716 IPR017938 -
Gso1g1892 927 MobiDBLite consensus disorder prediction 760 782 - -
Gso1g1892 927 SFLD NADPH oxidase subgroup (NOX) 102 927 - -
Gso1g1892 927 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 720 927 IPR039261 -
Gso1g1892 927 Pfam Respiratory burst NADPH oxidase 145 244 IPR013623 GO:0004601|GO:0050664
Gso1g1892 927 PANTHER NADPH OXIDASE 28 927 - -
Gso1g1892 927 Gene3D - 714 927 IPR039261 -
Gso1g1892 927 Gene3D - 146 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1892 Gso-Chr1 55649993 55659983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1892 9 927 Miscellaneous Gene Families AT1G64060 75.873 0.0 1496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1892 K13447 - gmx:100805517 1850.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1892 1 55649993 55659983 Gso1g1892 1 55649993 55659983 ECH