Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1889 ATGAACAACAGTTTGCCGGCGTTGACATCGGATACGTCGCCGTCAGTGGTGAACTTGTTCAGAATCAACAAAGTTGCGGACCGTTTGTCTTGGATTGCTCAACCTGGCAACCGAGGCGAGCCTTACGAATTTTACAACCTCTGCCTCTCCCTCTCTCGAGGCATTGATTATGCACTTGCCAATGGCGAAACTCCACCCAAGGCTCATGAACTGCCACTACTTGTGAAACAGATATGTCAACTAAAAAATGATGAATGTTCGCAAGCGGCTATGATGGTATTGATGATATCTATAAAGAATGCTTGTGAAATTGGATGGTTCCAAACAAAAGAATCTGAAGAACTTGTTACTATTGCTGATGAGATCAGAAAGGTCTACAGCAGTTTGGGGACTATTAATGTTGGACCTAGATCTTGCAGTACTGCAATATCAACAATAATGCAGAAGTTCTATCCTAAATTTAAATTGGGTCCCATACTTGCATCGATTGAAGCCCAACCTGGATATGGAGCTTCCGTGGTTGATTTTCATATTACCAAGAGTGAAGTTCTTAAAGACAAAATTTTTTTATTGGTGGCACAAACAGATAACATTGAGACATCAGCATGCCTCATAAATCCTCAGCAAGTGAATTTTCTCCTCAATGGAAAAGGAGTACTTAATAGGACTAATGTTCAAATGGATCCTGGACCACAGGTGCCAACTAATGTGACTGGTATGCTTAAATTTGGGACAAATCTTCTTCAAGCTGTGGGCCAGTTCAATGGTCGTTATGTTGTACTTGTTGCCTATATGAGTTTTACACCTTTTCTTGAGGATCCAGTTCTTCAAGATTATCTTCAGCCTGCTGTTACATCTGTTGATTCAGATTCAGATATTATTGAGGGGGCTTCACAGATTTCACTTAATTGTCCAATAAGCTTTACACGTATCAAGACTCCTGTTAAAGGGCATTCATGCAAACATTTCCAGTGTTTTGACTTTGACAACTTCATTAATATGAATTCAAAAAGGCCATCCTGGCGCTGCCCTCATTGCATTCAGAATGTCTGTTATGCTGATATTCGTCTTGACCGAAACATGGTTGAGATCCTGAAAAATGTTGGTGAGAACATTACGGAAGTGATTGTCCTTGCTAATGGATCATGGAAGGCAGTCTTGGAAAAGGATCATGATGTGGATAAGATGCAGAAGAAGGCACGCAATTGTGAAAAGGAACAAACTCAACCACAAGAATCTACTTGCCCTCCTGGTACTGTTGACCTCACCAAAGATGATGATGGTTTGGATACAGTGGGCTCTTGTGATATTGTAGAAAGAAAACCTACCCCGGCATCTATTCATAGTCAGTTTGTCACCCCAAATTCAACTTCCTTGGGTATGAACTCTACTGGTGCTAATCAAAATGTTGCCACTCAAATAGATGACTTTTGGCCTGGAGTTTGTTTTGTCCGTAGTAGGTCTGATACCCCAACAGTTGGTAATTCTGAGCTACCTGTTCTGCCTGATACTGTTTCTCCTGCATTTAGTCAGGAATCTGCTGGTCATGACAATAACCCTGTTGTTAACTCTGCCATGCATAATCAATTTTTGGGACCAAACAACTTGCAGATGCAGATGAATCATATGAATTCAGTTAACGAGTATGGCAGATCATCCTCAGCACCAAGACATATTCATAGGACTCCGGTAGCTGTTCAGGCCCTCCCAGTCCAATCTCAGGCATTGGGACCACAGCAAAATTCAATAACTAATTTGAATAGTTCCTTGCTACCTAGCAATTCCTCTGCTACTCCTCATATTTCTTTGTCCAACCCTACCTCTGTAGATACTTTGAATGCCATACTAAGTGATACGGAAAGACAACAACATTTTTCTCGAACCCCAATGAATCTGCCTCAGGTCTCAGGTGTAAATTCACCTGCATTTCAGCATCACACTGCAACACAGAATCGGGGACCACTTATAAATACGTCAGCACCAACTCAACCGCAGAACCAATACAGAGCAAATGCGTTTTCTGAATTTAGAAATTTGCATCTGCAGCAAGCTCTGAATCTCCGGCCACCCCCACCAAGATCATCTAATGCCCAATGGCCCCACATCCAGCAAGGTGTTCCGCAATCTGGGAATTTTCAGGCGGCAGCCAGGGGTGCTTCACTGGCTGCTGGACAAGGTAGTTCCCATGCTAGGAATGTTCCAACATCTGGAGCTACTACTCATAGCCATCAAGCTAGAGGTATGGTTGCTAACCAGCCTGCCAGGCCATCTGTTTTGGTTCAAAATCAAAGTACCGTAGCAGGCACCCCTTTCCACGGGTTAACAACAGAGCAAAGAGGAAATACAGCACAGTCAGTTTCTAGGCCTGAAGAATTATTCAGTTCGCAATCAGAACAGAATTGGGCTCCCACTGGACGAATGCGTGGAAGTCTAGATTTAAGTCAGCTTAATGATGAGTCTATTGCACAGCGAATAATTACGCCAACACAAGGTCAAAATTCAAGGCCACCAGGTCCACAACCCATTCGACGGACCGGTATTTCCTCTTTGCAACCCGCCACGACCCAACAGGATGTGCTTATTGCAAACAATAGAAATGCAAATGCTCATAATCGTTCTTCCAGTAGATAA 2631 0.4295 MNNSLPALTSDTSPSVVNLFRINKVADRLSWIAQPGNRGEPYEFYNLCLSLSRGIDYALANGETPPKAHELPLLVKQICQLKNDECSQAAMMVLMISIKNACEIGWFQTKESEELVTIADEIRKVYSSLGTINVGPRSCSTAISTIMQKFYPKFKLGPILASIEAQPGYGASVVDFHITKSEVLKDKIFLLVAQTDNIETSACLINPQQVNFLLNGKGVLNRTNVQMDPGPQVPTNVTGMLKFGTNLLQAVGQFNGRYVVLVAYMSFTPFLEDPVLQDYLQPAVTSVDSDSDIIEGASQISLNCPISFTRIKTPVKGHSCKHFQCFDFDNFINMNSKRPSWRCPHCIQNVCYADIRLDRNMVEILKNVGENITEVIVLANGSWKAVLEKDHDVDKMQKKARNCEKEQTQPQESTCPPGTVDLTKDDDGLDTVGSCDIVERKPTPASIHSQFVTPNSTSLGMNSTGANQNVATQIDDFWPGVCFVRSRSDTPTVGNSELPVLPDTVSPAFSQESAGHDNNPVVNSAMHNQFLGPNNLQMQMNHMNSVNEYGRSSSAPRHIHRTPVAVQALPVQSQALGPQQNSITNLNSSLLPSNSSATPHISLSNPTSVDTLNAILSDTERQQHFSRTPMNLPQVSGVNSPAFQHHTATQNRGPLINTSAPTQPQNQYRANAFSEFRNLHLQQALNLRPPPPRSSNAQWPHIQQGVPQSGNFQAAARGASLAAGQGSSHARNVPTSGATTHSHQARGMVANQPARPSVLVQNQSTVAGTPFHGLTTEQRGNTAQSVSRPEELFSSQSEQNWAPTGRMRGSLDLSQLNDESIAQRIITPTQGQNSRPPGPQPIRRTGISSLQPATTQQDVLIANNRNANAHNRSSSR* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1889 876 MobiDBLite consensus disorder prediction 825 876 - -
Gso1g1889 876 SUPERFAMILY RING/U-box 300 376 - -
Gso1g1889 876 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 22 737 - -
Gso1g1889 876 Pfam MIZ/SP-RING zinc finger 300 347 IPR004181 GO:0008270
Gso1g1889 876 CDD SP-RING_PIAS_like 301 346 - -
Gso1g1889 876 ProSiteProfiles Zinc finger SP-RING-type profile. 289 370 IPR004181 GO:0008270
Gso1g1889 876 MobiDBLite consensus disorder prediction 725 744 - -
Gso1g1889 876 MobiDBLite consensus disorder prediction 768 809 - -
Gso1g1889 876 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 386 IPR013083 -
Gso1g1889 876 MobiDBLite consensus disorder prediction 688 715 - -
Gso1g1889 876 MobiDBLite consensus disorder prediction 401 423 - -
Gso1g1889 876 PANTHER E4 SUMO-PROTEIN LIGASE PIAL2-LIKE 22 737 - -
Gso1g1889 876 MobiDBLite consensus disorder prediction 686 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1889 Gso-Chr1 55617373 55625588 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1889 K04706 - gmx:100780539 1697.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1889 1 55617373 55625588 Gso1g1889 1 55617373 55625588 ECH