Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1881 ATGAAAGGTTCGGAGAAAGTAATGTGGGATCAGGGTCGATGTGCACGATCCTCGGCCTCCCAGAAGCTTATGGTATGGCTCATGTTCCTGGTTTCACTCACCTACATGGCTTACACTCTCAAGCTGGTATCCACGTCCACGTCATCAAGCACGTGCAACCACGCGCCTTTCATCATCAACCACCTCTCCTCCACAACCTCTTTCTCTTCCTCAAATGGAACGGAGTGGCCGGAAGCGGAATCTTCATCTTCATCCCACAATTCCCGTGCCGGAAAGGGGAAACGGGGGCAGAAAACGGAGCTCCGGCACCTGGTGTTCGGAATCGCGGCGTCGTCGAAGCTATGGGAACACAGAAAGAACTACATAAAGATTTGGTACAAGAAGGAGAAGATGAGGGGAGTGGTGTGGCTGGACGATCGCGTGAAGAGGAACCCCAGCGAAGGGTTGCCACCAACCAAGGTTTCCACCGACACTTCCAATTTCGTATACACCAACAAGCTGGGCCACCGCTCCGCGATTCGAATATCGCGCATCGTGACGGAAACGCTGCGTATGGGGCACAAGGACGTGCGGTGGTTCGTGATGGGCGACGACGACACCGTTTTCGTGACGGACAATCTGCTGAGGATTTTAAACAAGTACGACCACAACTACATGTACTACATTGGGAGCTTGTCGGAGAGTCACTTGCAGAACATATTCTTCTCCTACGGCATGGCCTATGGTGGGGGCGGTTTCGCCATAAGCTACCCTTTGGCCAAAGCTCTGAGCAAAATGCAGGACCGTTGTATTCAGCGCTATCCTGCTCTCTATGGCTCCGATGATCGAATGCAAGCTTGCATGGCTGAACTCGGTGTTCCACTCACTAAGGAAATCGGTTTTCACCAGTATGATGTGTATGGGAACTTGTTTGGGCTTCTTGCAGCTCATCCAGTGACTCCATTGGTGTCACTGCACCACCTTGATGTGGTTGAGCCAATCTTCCCAAATGCCACTAGAGTAGAAGCCATTAAACGGCTAACCATTCCAATGAAGCTTGACTCGGCATCTCTCATTCAACAATCCATTTGCCATGACAGAAATAGGAGATGGACCATTTCAGTGTCATGGGGTTTTGCTGTTCAGATATTTCGCGGGATATTTACACAGCGGGAGATGGAAATGCCTTCAAGAACATTTCTCAATTGGTATAGAAGAGCAGATTACACTGCATATGCCTTCAACACACGCCCGTTTAGCAGAAACCCGTGTCAGAAACCTTTCGTGTTTTACTTTTCAAAGGCAAAACTCAATTCTACCTTGCAACAAACAGTGACTGATTATGAAAGAGATCCGATTCCTTCTCCAGAATGTCGATGGAATATGGCTGATCCTTCTGCTCTTGACAAAATAGAGGTGCATAAGAAGAAAGACCCGCATCTATGGGATAGAGCCCCAAGGAGAAACTGTTGTAGAGTGATGAAATCGAACAAGACAGGAATCTTGAAGATAGAAGTGGCTGTATGTAGAGATGGTGAGTTCAGTGAACCTGCTTAA 1536 0.487 MKGSEKVMWDQGRCARSSASQKLMVWLMFLVSLTYMAYTLKLVSTSTSSSTCNHAPFIINHLSSTTSFSSSNGTEWPEAESSSSSHNSRAGKGKRGQKTELRHLVFGIAASSKLWEHRKNYIKIWYKKEKMRGVVWLDDRVKRNPSEGLPPTKVSTDTSNFVYTNKLGHRSAIRISRIVTETLRMGHKDVRWFVMGDDDTVFVTDNLLRILNKYDHNYMYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALSKMQDRCIQRYPALYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNATRVEAIKRLTIPMKLDSASLIQQSICHDRNRRWTISVSWGFAVQIFRGIFTQREMEMPSRTFLNWYRRADYTAYAFNTRPFSRNPCQKPFVFYFSKAKLNSTLQQTVTDYERDPIPSPECRWNMADPSALDKIEVHKKKDPHLWDRAPRRNCCRVMKSNKTGILKIEVAVCRDGEFSEPA* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1881 511 MobiDBLite consensus disorder prediction 73 96 - -
Gso1g1881 511 Pfam Protein of unknown function, DUF604 231 484 IPR006740 -
Gso1g1881 511 PANTHER FRINGE-RELATED 10 509 - -
Gso1g1881 511 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 10 509 - -
Gso1g1881 511 Gene3D - 92 349 - -
Gso1g1881 511 MobiDBLite consensus disorder prediction 73 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1881 Gso-Chr1 55549322 55554813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1881 1 509 Glycosyltransferase AT4G23490 63.501 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1881 - - gmx:100801444 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1881 1 55549322 55554813 Gso1g1881 1 55549322 55554813 ECH