Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1879 ATGGCTGTGTTACCTTTCTCATACTCAGGATTTCCCACTCTATCTCTCCCATTATCTCAACAAAAACGGCTTAAAACGAAACCAAATTCCAACACAAACACATGCTCACTAATCCAATGCTGCCACAACCAAACAGAACCAATCGAACTAAATGGCCAAGCCAGATTTCCAGAGAAGAATCCTCACATCAACCCTGCCGCTGCAGTTCCACCAAGGCCTCGAAGGATAATCCTTGTTAGACACGGAGAGAGTGAAGGAAACGTGGATGAGAGCGTGTACACAAGGATACCTGATCCAAAGATATCCCTCACTGAGAAAGGAAAGGTCCAAGCAGAGGAATGTGGTAAAAGGATTAAGCAAATGATTGAGAATGACCATGACCAACATTGGCAGGTTTACTTCTACGTCTCTCCATATAGAAGGACCCTTCAAACCTTGCAGCACCTCGCTCGTCCTTTTCAACGCTCAAGAATCGCTGGCTTCAGAGAAGAGCCTCGCATTCGAGAACAAGATTTCGGGAATTTTCAAAACAGAGAAAAGATGAGAGTGGAAAAGGCATTACGCCAGCGTTATGGTCGTTTCTTTTACCGATTTCCAGATGGAGAATCCGCGGCTGATGTATATGATAGAATAACAGGATTCAGAGAAACGCTAAGAACAGATATTAACATTGGACGGTATCAGCCACCTGGGGAGAAAAAAACAGACATGAACTTGGTCATTGTGTCTCACGGACTAACACTTCGAGTTTTTCTGATGAGGTGGTACAAATGGACGGTTCAACAGTTCGAGAGTCTCAACAACATGGGAAATGGAAATATGCTTGTCATGGAAAAGGGTTTTGGTGGAAGGTATAGCTTACTGATGCATCATGGAGAAGAGGAACTGAGACGGTTTGGATTGACTGATGAAATGTTGATTGATCAGGAGTGGCATAAATTTGCAAAGCCTGCTGATCTGAATTACGATTGTCCAATGGTCAATTCCTTCTTTCCCCACCTCAGTGAAGAAGCATGCAGGTACGGTTAA 1029 0.4383 MAVLPFSYSGFPTLSLPLSQQKRLKTKPNSNTNTCSLIQCCHNQTEPIELNGQARFPEKNPHINPAAAVPPRPRRIILVRHGESEGNVDESVYTRIPDPKISLTEKGKVQAEECGKRIKQMIENDHDQHWQVYFYVSPYRRTLQTLQHLARPFQRSRIAGFREEPRIREQDFGNFQNREKMRVEKALRQRYGRFFYRFPDGESAADVYDRITGFRETLRTDINIGRYQPPGEKKTDMNLVIVSHGLTLRVFLMRWYKWTVQQFESLNNMGNGNMLVMEKGFGGRYSLLMHHGEEELRRFGLTDEMLIDQEWHKFAKPADLNYDCPMVNSFFPHLSEEACRYG* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1879 342 PANTHER OS06G0109000 PROTEIN 23 335 - -
Gso1g1879 342 SMART PGAM_5 75 251 IPR013078 -
Gso1g1879 342 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 78 87 IPR001345 GO:0003824
Gso1g1879 342 CDD HP_PGM_like 75 278 IPR013078 -
Gso1g1879 342 Pfam Histidine phosphatase superfamily (branch 1) 76 274 IPR013078 -
Gso1g1879 342 PANTHER BROAD-RANGE ACID PHOSPHATASE DET1 23 335 - -
Gso1g1879 342 Gene3D - 72 305 IPR029033 -
Gso1g1879 342 SUPERFAMILY Phosphoglycerate mutase-like 73 284 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1879 Gso-Chr1 55522831 55524662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1879 - - gmx:100800012 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1879 1 55522831 55524662 Gso1g1879 1 55522831 55524662 ECH