Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1871 ATGGCTTCGGAGAAGATTTGCTCGATTCTCTTGTTTTGTGCTGTAATTTTGCTTCTCCGTGATGCTCCTTCTGCCATAGCTGGGGACATAGTTCACGACGACGATTCAACTCCCAAGAAGCCGGGTTGCGAGAACCAGTTCGTTCTGGTAAAAGTGCAAACATGGGTCAATGGTGTAGAGGATGTTGAATTTGTTGGTGTGGGTGCCAGATTTGGCAGAGCCATTGTGTCCAAAGAGAAAAATGCAAAGCACACGCGCCTTATTCTTTCAGATCCTCGTGATTGTTGCATTCCGCCAAAGAATAAGATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACGTTCACAAAAAAGGCAAATATTGCACAGAATGCTAATGCTTCAGCCATCCTCATCATAAATAACCAAAAAGAACTGTACAAGATGGTTTGCGAACCTGATGAAACTGATTTGAACATACACATACCTGCTGTCATGCTTCCACTAGATGCAGGTACAAGGCTGGAAAAAATGCTGACAACTACTTCATCTGTGTCTGTGCAGCTGTACTCGCCACTTCGACCAGCTGTTGACGTAGCAGAAGTATTTCTTTGGATGATGGCAGTTCTTACCATATTGTGTGCATCATATTGGTCAGCTTGGACGACCCGAGAAGCAGCTATTGAACAGGATAAGTTGCTAAAGGATGCTTCAGATGAACTCCCAAACACTAAATATGCTAGTGTTAGTGGAGTTGTAAATATGAATGTGAAAGCTGCAGTCCTTTTTGTTGTATTTGCTTCGTGTTTCCTGTTTATGCTTTACAAACTGATGTCGTCGTGGTTCATTGATGTTTTGGTTGTTCTCTTCTGTATTGGTGGTATTGAGGGCTTGCAAACATGCTTGGTTGCTCTTTTGTCCAGGTGGTTCAAGCATGCCGGAGAGTCATACATCAAAGTACCTTTCTTAGGAGCTATCTCATACCTGACTTTGGCTGTTTCTCCATTCTGTATAACATTTTCCATTCTCTGGGCAGTTTATCGCAACGAATCCTTTGCCTGGATTGGTCAAGATATACTTGGAATAACACTGATAATCACAGTTCTACAGATTGTACATGTACCAAATCTCAAGGTTGGTACAGTACTTCTTGGCTGTGCCTTCATTTACGACATCTTTTGGGTATTTGTCTCAAAGAAGTTTTTCAAGGAAAGCGTCATGATTGTGGTGGCCCGAGGCGATCGAAGTGGAGAAGATGGAATTCCCATGTTACTGAAGTTCCCTCGGATTTTTGATCCATGGGGTGGTTACAGCATCATAGGTTTTGGAGACATCCTTTTACCAGGAATGCTGGTGGCATTCTCACTCAGGTACGATTGGCTGGCAAACAAGAGCCTTAGAAGTGGATATTTCTTGTGGGCAATGTTTGCATATGGCTTTGGTCTTTTAGTTACGTACGTGGCACTAAACTTGATGGACGGGCATGGCCAACCAGCACTACTATACATCGTTCCATTTACCCTTGGGACCCTGATGACATTGGGGCGGAAGCGAGGAGATTTGAGGGTTTTGTGGACTAGTGGAGAACCTGAAAGACCTTGTCCACATATAAGACTCCTACACAGTGGAGAACTAAACTGTGAATGA 1632 0.4375 MASEKICSILLFCAVILLLRDAPSAIAGDIVHDDDSTPKKPGCENQFVLVKVQTWVNGVEDVEFVGVGARFGRAIVSKEKNAKHTRLILSDPRDCCIPPKNKIVGDVIMVDRGNCTFTKKANIAQNANASAILIINNQKELYKMVCEPDETDLNIHIPAVMLPLDAGTRLEKMLTTTSSVSVQLYSPLRPAVDVAEVFLWMMAVLTILCASYWSAWTTREAAIEQDKLLKDASDELPNTKYASVSGVVNMNVKAAVLFVVFASCFLFMLYKLMSSWFIDVLVVLFCIGGIEGLQTCLVALLSRWFKHAGESYIKVPFLGAISYLTLAVSPFCITFSILWAVYRNESFAWIGQDILGITLIITVLQIVHVPNLKVGTVLLGCAFIYDIFWVFVSKKFFKESVMIVVARGDRSGEDGIPMLLKFPRIFDPWGGYSIIGFGDILLPGMLVAFSLRYDWLANKSLRSGYFLWAMFAYGFGLLVTYVALNLMDGHGQPALLYIVPFTLGTLMTLGRKRGDLRVLWTSGEPERPCPHIRLLHSGELNCE* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1871 543 Gene3D - 25 187 - -
Gso1g1871 543 SUPERFAMILY PA domain 103 178 IPR046450 -
Gso1g1871 543 Pfam PA domain 96 170 IPR003137 -
Gso1g1871 543 Pfam Signal peptide peptidase 247 524 IPR007369 GO:0004190|GO:0016021
Gso1g1871 543 PANTHER SIGNAL PEPTIDE PEPTIDASE 9 540 IPR007369 GO:0004190|GO:0016021
Gso1g1871 543 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 2 9 540 - -
Gso1g1871 543 SMART psh_8 246 513 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1871 Gso-Chr1 55443881 55450296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1871 K09597 - gmx:100796300 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1871 1 55443881 55450296 Gso1g1871 1 55443881 55450296 ECH