Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1869 ATGGTGAATCGTCGACGCCTCACCCGGGTGGCGACGAGCGACGATGAAGACGAGGCACCGCGTCCACAACGCACGCGGAAGAGGATGAGGCTTATCGAGGAAGATAACGATGATGACGAGAATGAAGAAGAGAAACAACAAGAGGTGCCGGAACTGCCTCAGCCTGCGGAGGACGCTAAGCCTCTTGGCGAACCCGTTAGGGTTTCGGGAAAAGGAAGAGGAAGGAAGAGGCACTATGATTCCTTCGAGTTCGATGGCATCCAATATATTCTCGAGGATCCTGTTCTTCTTGTACCCGAGGAGAAAGGCCAGAAGCCATATGTTGCAATTATTAAGGACATTACGCAGTCTATCAGTGGCAACGTGAAAGTGACGGGGCAGTGGTTTTATCGTCCCGAAGAAGCCGAGAAAAAAGGTGGTGGAAACTGGCAATCGTGTGATACCAGGGAACTGTTTTATAGTTTCCACCGTGACGATGTTCCTGCGGAGGCTGTTATGCACAAGTGTGTGGTACATTTTGTTCCCAGACACAAACAGCTTCCAAAGCGTAAGGATCACCCGGGGTTTATTGTACAGAAGGTGTATGACACTGTGGAAAGAAAGCTCTGGAGGCTGAGTGATAAGGATTATGAGGATATTAAGCAGCAAGAGATTGATGTGCTTGTTGAGAAGACTCTGCAACGTATTGGTGAACTACTTGACCTTGAGCCTGAGGAAGCCCCTGATGACGATGAGGATCAATTGAAAAATAGAAAAAGCTTAAGGAGAAAGAGTGTTTCACCTCTTGATGTTTCAAAGGAGGAAGAAGAAACTCTTAAGAGTGAACAACATCCAAAGTCTGAAACACCAGCGGGTTGCATAACTAATCCCTCAGAGTATTATCGGATATTGGTAGAATTCAATGCACTAACTGGAGATAGCCATCGAGACAAATGGTTGGAGAGGTTGCTTCAACGCATTCATTACATGTGTGATTCTAATGATAGCAAAGAAAGGGACAAAGGATTAGGAAATGTCAATTCTGATGAAATCAACGGTGGAAGCAAGCATAGAAGTTCAGAGTCAGCAAATGTCTGTCAAGATAAGGTTCAGAAGAGTTCCAAGTCTTTTATTTGGCCAGATGCTGGTGTTTCAGCCATGGTTGCTCTCGAAAAAGCTTCTCATGATGCTCTCTCATCAGATTCTATGAAGTACAACCAAAAGTTGCGCCAATTAGCTTTTAATTTCCAGAAAAATGCAGTGTTAGCACGCCGTCTATTAAGTGGAGAGTTGGAGCCTTCAAAAATATTAAATATGACACCCAATGAATTAAAGGAGGGTTTGGTTGCTGAGGAAAAAACCAAGGAGGAGCCTGACAAGATCCAGCACTTGCAAATGACAGATGCTCGCTGCTCAAAATGCATGGATTGTAAGGTGGCCTTGAGAGAGATTATCCAAGCTGGAAATAATGAACGTTATCAGCTGGAATGTGTTTCCTGTGGTCATTCCTGGTATGCCTCCCGGGATGAGGTGTCTATGCTGACCATAGATGCATCAGATTCTAAGGGAAACATAGGCACAGCGCTATAG 1569 0.4512 MVNRRRLTRVATSDDEDEAPRPQRTRKRMRLIEEDNDDDENEEEKQQEVPELPQPAEDAKPLGEPVRVSGKGRGRKRHYDSFEFDGIQYILEDPVLLVPEEKGQKPYVAIIKDITQSISGNVKVTGQWFYRPEEAEKKGGGNWQSCDTRELFYSFHRDDVPAEAVMHKCVVHFVPRHKQLPKRKDHPGFIVQKVYDTVERKLWRLSDKDYEDIKQQEIDVLVEKTLQRIGELLDLEPEEAPDDDEDQLKNRKSLRRKSVSPLDVSKEEEETLKSEQHPKSETPAGCITNPSEYYRILVEFNALTGDSHRDKWLERLLQRIHYMCDSNDSKERDKGLGNVNSDEINGGSKHRSSESANVCQDKVQKSSKSFIWPDAGVSAMVALEKASHDALSSDSMKYNQKLRQLAFNFQKNAVLARRLLSGELEPSKILNMTPNELKEGLVAEEKTKEEPDKIQHLQMTDARCSKCMDCKVALREIIQAGNNERYQLECVSCGHSWYASRDEVSMLTIDASDSKGNIGTAL* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1869 522 MobiDBLite consensus disorder prediction 8 34 - -
Gso1g1869 522 Pfam BAH domain 88 202 IPR001025 GO:0003682
Gso1g1869 522 MobiDBLite consensus disorder prediction 236 286 - -
Gso1g1869 522 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 521 - -
Gso1g1869 522 SMART mid_6 306 447 IPR003618 GO:0006351
Gso1g1869 522 MobiDBLite consensus disorder prediction 1 75 - -
Gso1g1869 522 Gene3D - 296 439 IPR036575 GO:0006351
Gso1g1869 522 ProSiteProfiles BAH domain profile. 87 206 IPR001025 GO:0003682
Gso1g1869 522 SUPERFAMILY Elongation factor TFIIS domain 2 303 438 IPR036575 GO:0006351
Gso1g1869 522 SMART BAH_4 87 206 IPR001025 GO:0003682
Gso1g1869 522 MobiDBLite consensus disorder prediction 341 358 - -
Gso1g1869 522 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 521 - -
Gso1g1869 522 Pfam Transcription factor S-II (TFIIS), central domain 304 456 IPR003618 GO:0006351
Gso1g1869 522 MobiDBLite consensus disorder prediction 327 358 - -
Gso1g1869 522 CDD BAH_plant_3 69 215 - -
Gso1g1869 522 MobiDBLite consensus disorder prediction 244 277 - -
Gso1g1869 522 Gene3D - 71 295 IPR043151 -
Gso1g1869 522 ProSiteProfiles TFIIS central domain profile. 308 465 IPR003618 GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1869 Gso-Chr1 55429303 55433929 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1869 - - gmx:100776280 1008.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1869 1 55429303 55433929 Gso1g1869 1 55429303 55433929 ECH