Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1867 ATGGGATCCCTTGATCTGAAATGGAACTCATCGGGATGCATGGTTTTGAGAAAGGTAGAGTCAACTAAAACTAAAGGGGAAGATATGTCTTCCCTGTGTGGTAGTTCAGCCTATCTGTACAAAAGGAGAGGAAGAAGAATAAGATGCAGAGAACAAAGAGTAAATATTGTTGCTACGGGGCCAGCCATAGATCATGCTCCTGTTATTGCCAAGCCCTTGACTAAAGATGATCTAATTGACTACTTCGTATCTGGTTGCAAGCCCAAACATAACTGGAGAATAGGTACAGAGCACGAGAAGTTTGGTTTTGAGCTTAAAACTTTACGTCCGATTAATTACAAACAAATATCAGCTTTACTCAATCGCATAGCTACAAGATTTGATTGGGAAAAAATAATGGAAGGTGACAACATCATAGGACTCAAAAATGGCAAGCAAAGCATATCATTAGAACCTGGTGGTCAATTTGAGCTTAGTGGTATGCCTTTGAAAACATTGCATCAAACTTGTGATGAGATTAATTCACATCTCTATCAGGCTAAAACTGTTGCTGAGGAAATGGGAATTGGATTTTTGGGATTAGGTTTTCAGCCTAAATGGAGACTGGAAGACATACCTGGAGTGCCTAAGGTACGATATAACATCATGCAAAATCACTTGGGTAAATTTGGCTCACCTACAATTGAATCATTGTTCATGACATGCTCAGTTCAGGTCAACCTGGACTTCAGTTCTGAAGCAGACATGATCAAGAAAATGCGTGCCAGTATTGCTTTGCAGCCTTTGGCAGCAGCCTTATTCGCTAATTCACCTTTCAAGGAAGGGGTTCCAAATGGTTATCTCACCATAAGAAGCCATAGGGTGGGTCAGATGGACAAAAGTCGCGCTGGCATACTCCCCTTTGTTTTTTATGACACTTTCGGGTTTGAGAAGTATGTTGATTACGCTCTTGATGTGCCAATGTTGTTTGTTTATCGAAAAAACAAGTACATTGACTGCCGGGGCATGTCATTCAGGGACTTCATGGCAGGTAAACTCCCTGTCATTCCTGGTCAGGTGCCAACGCTTGGTGACTGGGAAAATCATCTAACAACTATATTTCCTGAGGTCAGGCTAAAGAGGTACATGGAAATGAGGGGTGCTGATGATGGCCCTTTGGAAATGTTATGCGCTCTGCCGGCTTTTTGGGTAGGTTTACTGTATGATGAGGTTTCGCTACAAAATGTTCTAGATATGATTGCTGATTGGACCCCCGAAGACATACAGAATTTAAGGAATAAGGTTCCTATAACTGGTTTAACGACTCCAGTTCAAGGTAGACTGCTGCAACATATTGCAGAAGACACTTTGAAGTGGGCAAAGGATGGCTTGGACAGAAGATGCTTAAATGAATCCGTTTTCTTGGATCCATTGAAGGAAGTGGTTGGAACAGGTTTGACCCAAGCCGACAAGCTATTGGAGATGTATAATAACAAGTGGGGAAACAACATAGATCCTGTTTTCAGAGAGCGCTGCTACTAA 1521 0.4188 MGSLDLKWNSSGCMVLRKVESTKTKGEDMSSLCGSSAYLYKRRGRRIRCREQRVNIVATGPAIDHAPVIAKPLTKDDLIDYFVSGCKPKHNWRIGTEHEKFGFELKTLRPINYKQISALLNRIATRFDWEKIMEGDNIIGLKNGKQSISLEPGGQFELSGMPLKTLHQTCDEINSHLYQAKTVAEEMGIGFLGLGFQPKWRLEDIPGVPKVRYNIMQNHLGKFGSPTIESLFMTCSVQVNLDFSSEADMIKKMRASIALQPLAAALFANSPFKEGVPNGYLTIRSHRVGQMDKSRAGILPFVFYDTFGFEKYVDYALDVPMLFVYRKNKYIDCRGMSFRDFMAGKLPVIPGQVPTLGDWENHLTTIFPEVRLKRYMEMRGADDGPLEMLCALPAFWVGLLYDEVSLQNVLDMIADWTPEDIQNLRNKVPITGLTTPVQGRLLQHIAEDTLKWAKDGLDRRCLNESVFLDPLKEVVGTGLTQADKLLEMYNNKWGNNIDPVFRERCY* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1867 506 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 83 506 IPR035434 GO:0004357|GO:0006750
Gso1g1867 506 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 72 506 IPR011556 GO:0004357|GO:0006750
Gso1g1867 506 PANTHER GAMMA GLUTAMYL CYSTEINE SYNTHETASE 83 506 - -
Gso1g1867 506 Gene3D - 58 506 - -
Gso1g1867 506 PIRSF GCL 59 506 IPR035434 GO:0004357|GO:0006750
Gso1g1867 506 Pfam Glutamate-cysteine ligase family 2(GCS2) 126 416 IPR006336 GO:0004357|GO:0042398
Gso1g1867 506 SUPERFAMILY Glutamine synthetase/guanido kinase 84 493 IPR014746 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1867 Gso-Chr1 55414314 55420036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1867 K01919 - gmx:100775188 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1867 1 55414314 55420036 Gso1g1867 1 55414314 55420036 ECH