Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1855 ATGATGCAGAGATTCATAACTGAAAGGTCGAAGAAACAGTTAACAACGGATTCCACTCTTGTAAAAAAGGCTCCAGTATCTACTTACACTCCTCTGCTACTCCTTCTCATCCTCCTCACCACTGCCTTTGTCTCTTCCCTCTGGTCTACGCTTTCTACGACTAACACTAAACCGACGATTATTGGCAAGAAAACCTCAGTGGCAAATGTTGTTTCTGCAAAGGATAGCAAAAGCGAAGAAAAATCTAGTAGCAGGAAAAGGTTTCAATTAGAAGCGACATTAAACTGCAGCAATAATGGGAAGCAAAGATGTACAAGTTATCCGACAAGTGGAGTGTTTGAAAGGGAGGAGGGAGGGGTGTGTCCGGAGTACTTCCGGTGGATCCACGAGGATGTTGGGGCGTGGAAAGAGAGAGGGATAAGCAGGGAGATGGTGGAGAGAGCGAAGAAGAGTGCACATTTTAGGTTAGTAGTGAAGAGAGGAAGGGTGTACGTGGAGAGGTATAAGAAATCGATACAGACACGTGAGGTGTTCACGATGTGGGGCATTGTGCAGCTTCTGAGGAAGTACCCAGGTAAAGTGGCAGACCTTGAGCTCATGTTTGATTGTGATGACTTACCAGTAATCCGTGGGAGCAGCCTGGCTGGGCCTCCACCCCTTTTCCGTTACTGCGGTGACCGCTGGACGGACGACATTGTCTTCCCTGATTGGTCCTTCTGGGGATGGGCTGAGATTAATATAAGGCCTTGGGAACATGTGTTGAAGGAGATGGAAAAGGGCAATAGAAGGATTAAATGGAATGACAGAGAACCATATGCCTATTGGAAGGGAAACCCTTTTGTTGCCGAAACCAGACAAGATCTCCTCAAATGTAATGTTTCAACCACCCAAGACTGGAATGCTCGTTTATATGTGCAGGATTGGATTCAAGAATCTCAACAAGGATTCAATAACTCAAACTTGGCAAGTCAATGCACACATAGATACAAGATATATATTGAAGGATATGCGTGGTCTGTGAGTGAGAAATACATCCTAGCCTGTGATTCCGTAACGCTAATGGTGAAGCCTCGTTTCTATGATTTCTTCATAAGAAGCCTGCAGCCAATGCAGCATTATTGGCCTATAAGGGACAAGGGCAAGTGCAAATCCATCAAACATGCAGTTGATTGGGGTAATAATCATAAGGAAGAGGCACAAAAAATTGGTAAAGCAGCAAGCAAGTTTATTCAAGAAGAGCTAAAGATGGATTACGTGTATGACTACATGTTCCATTTGCTAAATGAATATGCAAAGCTTCTAAAGTTTGAGCCAAGAGTGCCAGAAGGAGCTGAGGAGCTGTGTGTGGAGGCCATGGCATGCACAAGAAGTGGGTTAGAGAGGAAGTTTATGACTGAATCAATGGTTAGGGAGCCTTCAACAAAAGCCCCGTGCTCATTGCCTCCTCCGTTGGAGCCAACGTCGCGGAGGGTGTTTTATGCCAACAAACTAAATTCAATTAGGAGAGTTGAGAGGTGGGAAGATAACTATTGGAAAAACAGCACTCAACAGTTGCATACACGCATTTGA 1569 0.4481 MMQRFITERSKKQLTTDSTLVKKAPVSTYTPLLLLLILLTTAFVSSLWSTLSTTNTKPTIIGKKTSVANVVSAKDSKSEEKSSSRKRFQLEATLNCSNNGKQRCTSYPTSGVFEREEGGVCPEYFRWIHEDVGAWKERGISREMVERAKKSAHFRLVVKRGRVYVERYKKSIQTREVFTMWGIVQLLRKYPGKVADLELMFDCDDLPVIRGSSLAGPPPLFRYCGDRWTDDIVFPDWSFWGWAEINIRPWEHVLKEMEKGNRRIKWNDREPYAYWKGNPFVAETRQDLLKCNVSTTQDWNARLYVQDWIQESQQGFNNSNLASQCTHRYKIYIEGYAWSVSEKYILACDSVTLMVKPRFYDFFIRSLQPMQHYWPIRDKGKCKSIKHAVDWGNNHKEEAQKIGKAASKFIQEELKMDYVYDYMFHLLNEYAKLLKFEPRVPEGAEELCVEAMACTRSGLERKFMTESMVREPSTKAPCSLPPPLEPTSRRVFYANKLNSIRRVERWEDNYWKNSTQQLHTRI* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1855 522 SMART cap10 193 437 IPR006598 -
Gso1g1855 522 Pfam Glycosyl transferase family 90 119 507 IPR006598 -
Gso1g1855 522 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 20 514 - -
Gso1g1855 522 PANTHER O-GLUCOSYLTRANSFERASE RUMI-LIKE PROTEIN (DUF821) 20 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1855 Gso-Chr1 55322313 55326316 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1855 - - gmx:100793663 1060.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1855 1 55322313 55326316 Gso1g1855 1 55322313 55326316 ECH