Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1852 ATGTTTCGTTCTGCAAGATGGAGAAGCGAGAAGAACAGGGTCAAAGCTGTTTTCAAGCTGCACTTCCATGCCACCCAGGTGTTTCAATCTGGGATGGATGCATTGGTGCTGTCTATAGTTCCAGGGGACATTGGAAAGCCAACTACGAAATTAGAGAAAGCTACAGTTCGAGATAGAACTTGTAGATGGGAAAATCCGGTCTATGAAACTGTTAAGTTTATTCAAGAACCCAAGACTGGGAAAATCAATGACAAAATATATCATTTTTTGGTTTCAACGGGGTTACCAAAAGCTAGTTCCATTGGGGAGGTTTCTATGAATTTTGCTGATTATGTGGAAGCCACTAAGCCCTCCTCTGTCGCTCTTCCCATCAGGATTTCTCACTGTGATGCTGTTTTGCATGTATCAATTCAGAGGCTGCAAGAAAACGGTGATCGAAGAGAGGAAGAAGAATGTGAAGATGTGAAACTAAAGTCCGATGATAGGAGCTCAAGGAATCAATTAAGCAACGGCAATAAGGATGAAACAAGTAGAAGTTGTTCTTCTGAAGATGTGTCTGCCAAAGCAATCATCAATAGAGCTGAATTGAGTTCTAATTATAGGACATCTAGTGGCTCTGATATGACATTGTCAAGTTCTGATGACAGCTCTGGATTTGATACTCCCCGGGAAATTGGACCTAGAAAAAAGAACATCCACCTCAACACAAAAAGGTTTCTTCCAGACCCAGTTTTACACCATGCTTCAGAACCTCAAAACCTTGCTCTCAATGCCTCAACATCAATGCATGATGTACATCAGAGATCACACTGGGACTGGTCAGCGGGTTCGGAGCATAGGCTAAGTACAGATGATTCAACATATGGTTCTCATCATAATTCTCTCCCGAAGGAAAGCAACCAACAACCTTCTCCTTTAGAGATTGAAAGTCTCAAGGCTGAACTTGCTGCTTTGGCCAGGCAGGTGAATGTGTCAGACTTGGAATTACAGACCCTCAGGAAGCAAATTGTGAAGGAATGCAAAAGAGGGCAGGATCTTGCGAAAGAAGTCATCGTCTTGAAAGAGGAAAAGGAAGCACTCAGGACAGAATGTGACAATCTCAGGTCTTTTCAGAAACGCATGGATGAGGCCAAAGTGAGGAACAGATCACAATTGGAAGGTGGAGATCTTCATGCTCTTGTTGAAGAAATAAGACAAGAATTGGATTATGAGAAGGACCTAAACGCAAATCTCCGATTACAGTTAAAGAAGATGCAAGAATCTAATGCCGAACTGGTTCTTGCAGTGCAAGATCTGGATGAAATGTTGGAGCAGAAAAATAGGGACATATCTAACCATTCCTATATAAATGAGCAGGATAAAAATTCCCAAGAGAAAAGGAAAAACCTCTCTAAATGTGAAACGGATGATGACGAAGAACAGAAAGCATTGGAGGAGCTTGTTAAGGAACACACTGAAGCCAGTGAGACACACTTACTGGAGAAGAAAATAGTAGACCTCTATGGTGAAATAGAGATGTATAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAACAGCTTGCACTGGACTATGAGATACTGAAGCAGGAAAACCATGGCCTTGCATATAAGCTGGAGCAAAGCGATCTGCAAGAACAGTTGAAAATGCAGTATGAATGTTCATCTCCTCCTGCTACAATGAATGACATTGAAAACCACATCAAGAATCTGGAAGATCAACTCAAGGAACAATCAGAAGACTTCTCAAATTCTCTGGCTACCATTAAGGCACTTGAAAGCCATATCAGAGGATTAGAGGAGGAAATGGAGAAACAAGCACAAGGATTTGAAGCTGATCTAGAAGCAGTGATGCATGACAAAGTTGAACAAGAGAAAAGAGCCATCCAAGCTGAGGAAGCTTTGCGAAAGACCAGACTGAAAAATGCTAAAACTGCTGGGAGGCTTCAAGAGGAATTCCAAAGGCTCTCCTCGCAAATGACCACCACATTTGATGTGAATGAGAAGGCTACCATGAAAGCATTGACAGAAGCAAGTGAAGTGCGTGCACAGAAAAGATTACTGGAAGAAAAGCTGCATAATGTCAAAGAAGAACTGGAGTCATCTAAAGCTGATTATGAGGTAAAACTGAACCAACTTTCGAACCAAATAGATATGATGAAAGTTCAGATACAACAGATGTTGTTGGAAATTGAGGACAAGTCCAAGCAGCTTCAAAATCAGAAGAAGCACGAGGAACGAGTTATTAGGGATTTCTCTAATGAGATCGTGTTACTAAAATCTGAGAATGGAAAGCTTAATGAGGATATTTCATGCTTACATGATCAAGTAGAAGGAAAAGAAATTTTAAGAACTGACTTGGAAGCTATGAAAAAATCAATTGAGGAATCTGAGGCACTCGTACAGAAAGGAACTGTGGAAAGAAATGAACTGGTGGGTACAATTGCATTGTTGAAGAAGGAGGCAGAACAGTCACTTAATGAGCTAAACAGAATGAGACATCTTAAGGATAAAAAAGAAAAAGAGATTAGAGTCTTGCAATCAGAGTTGGAGGCTGTTAGAGCTCAGTACAGTGACCTGAAACTCTCTCTTTCTGAGGACGAAATTGAGAAAGAAAAACTACAAAAGCAAGTTTTGCAGCTAAAGGGTGAATTGAAGAAGAAAGATGATGCTTTAATCAGCACCGAGAAGAGGTTCAGGGAAAGTAATGGACGCGCACAACTTACTGATGGAACTAAAAATATTCCAAAGAACAAAAAAACTGCTTCAGTTCCTCAGAATTCAAAGGAAATAGCCAGTCTGAGGGAGAAAATAAAAACACTTGAGGGAATGATACAGTCAAAGGAAACTGCCTTGGAAACTTCAACAACTTCATTCTTGAAGAAGGAAAAGGAACTCCAGACCAAAATTGAGGAGCTGGAGGACAAATTGGAGGAATTCAACCAAAGTATTGCTTTGCAGAAGGTGGTTCAGGATAGAAGTACAGTTGAGCATCTCAATGCTGCTGCATCTTCCTCTGGGGTTGCATTGTTATTCAAGAGTAACGTAAACTTGCCGGAGAAAGAAGCAGGAACCTCCATAATGGATACTTCAGATAGCATTCTTGCTGACTTATTAACCGAGCTAACATCATTGAAGGAGAGAAACAAATCAATGGAAAGCGAACTTAAAGAGATGCAAGAGAGATACTTAGAAATGAGCCTCAATTTTGCCGAGGTAGAAGGTGAAAGACAAAAGCTCGTTATGACTGTACGGAATCTCCAGAAAGGCTAA 3273 0.4079 MFRSARWRSEKNRVKAVFKLHFHATQVFQSGMDALVLSIVPGDIGKPTTKLEKATVRDRTCRWENPVYETVKFIQEPKTGKINDKIYHFLVSTGLPKASSIGEVSMNFADYVEATKPSSVALPIRISHCDAVLHVSIQRLQENGDRREEEECEDVKLKSDDRSSRNQLSNGNKDETSRSCSSEDVSAKAIINRAELSSNYRTSSGSDMTLSSSDDSSGFDTPREIGPRKKNIHLNTKRFLPDPVLHHASEPQNLALNASTSMHDVHQRSHWDWSAGSEHRLSTDDSTYGSHHNSLPKESNQQPSPLEIESLKAELAALARQVNVSDLELQTLRKQIVKECKRGQDLAKEVIVLKEEKEALRTECDNLRSFQKRMDEAKVRNRSQLEGGDLHALVEEIRQELDYEKDLNANLRLQLKKMQESNAELVLAVQDLDEMLEQKNRDISNHSYINEQDKNSQEKRKNLSKCETDDDEEQKALEELVKEHTEASETHLLEKKIVDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHGLAYKLEQSDLQEQLKMQYECSSPPATMNDIENHIKNLEDQLKEQSEDFSNSLATIKALESHIRGLEEEMEKQAQGFEADLEAVMHDKVEQEKRAIQAEEALRKTRLKNAKTAGRLQEEFQRLSSQMTTTFDVNEKATMKALTEASEVRAQKRLLEEKLHNVKEELESSKADYEVKLNQLSNQIDMMKVQIQQMLLEIEDKSKQLQNQKKHEERVIRDFSNEIVLLKSENGKLNEDISCLHDQVEGKEILRTDLEAMKKSIEESEALVQKGTVERNELVGTIALLKKEAEQSLNELNRMRHLKDKKEKEIRVLQSELEAVRAQYSDLKLSLSEDEIEKEKLQKQVLQLKGELKKKDDALISTEKRFRESNGRAQLTDGTKNIPKNKKTASVPQNSKEIASLREKIKTLEGMIQSKETALETSTTSFLKKEKELQTKIEELEDKLEEFNQSIALQKVVQDRSTVEHLNAAASSSGVALLFKSNVNLPEKEAGTSIMDTSDSILADLLTELTSLKERNKSMESELKEMQERYLEMSLNFAEVEGERQKLVMTVRNLQKG* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1852 1090 MobiDBLite consensus disorder prediction 143 163 - -
Gso1g1852 1090 Coils Coil 343 363 - -
Gso1g1852 1090 Coils Coil 956 990 - -
Gso1g1852 1090 MobiDBLite consensus disorder prediction 164 185 - -
Gso1g1852 1090 Coils Coil 561 641 - -
Gso1g1852 1090 Coils Coil 815 891 - -
Gso1g1852 1090 Coils Coil 931 951 - -
Gso1g1852 1090 Coils Coil 780 800 - -
Gso1g1852 1090 MobiDBLite consensus disorder prediction 200 234 - -
Gso1g1852 1090 Coils Coil 678 769 - -
Gso1g1852 1090 MobiDBLite consensus disorder prediction 200 219 - -
Gso1g1852 1090 Coils Coil 1035 1076 - -
Gso1g1852 1090 Coils Coil 394 442 - -
Gso1g1852 1090 MobiDBLite consensus disorder prediction 280 304 - -
Gso1g1852 1090 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 6 1088 - -
Gso1g1852 1090 Coils Coil 497 531 - -
Gso1g1852 1090 MobiDBLite consensus disorder prediction 276 304 - -
Gso1g1852 1090 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 6 1088 - -
Gso1g1852 1090 MobiDBLite consensus disorder prediction 443 471 - -
Gso1g1852 1090 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 146 IPR019448 -
Gso1g1852 1090 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Gso1g1852 1090 Coils Coil 308 328 - -
Gso1g1852 1090 MobiDBLite consensus disorder prediction 143 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1852 Gso-Chr1 55298581 55304037 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1852 - - gmx:100792602 2047.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1852 1 55298581 55304037 Gso1g1852 1 55298581 55304037 ECH