Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1841 ATGTGCCAGTTATCATCTCCCTCCACTCTGTGTGAAAGCAATGAGGGCCATCCAAACATGCCCCCAACCAAAATTCATGAGGAGCCTGACATGTTCGTCCTTTTGATCCCCAAACCCCCAACAACAACAACATTCTTCGAACAAGGCCAAAATAACCAAAAGCCCCATAAAACCCATTTTTCCCTCGCCCTCGACGAAGTCAAATGCATAGCCAACATAGCATTACCCATGGTGCTAACCGGGTTACTACTCTATTCTCGCTCCGTAATCTCCATGCTCTTCCTCGGTCGCGTCGGTGAGCTCGCCTTAGCTGGTGGCTCTCTCGCCATTGGATTCGCCAACATCACGGGCTATTCTATTCTCTCGGGCCTCGCCATGGGCATGGAGCCCATTTGCGGCCAGGCTTTCGGGGCCAAAAGGTTCAAACTTTTGGGCCTCGCGATGCAGAGGACAATGGTCTTGCTTCTTCTAACTTGTGTTTTTATATCATTCTTGTGGTTCAACATGAAGAAAATATTGGTCCTGTGTGGCCAACAAGAAGACATCGCCACCGAAGCTCAATCTTTCATACTATTTTCAATTCCCGATCTTGTAGCACAATCATTGCTACACCCTTTGAGAATCTACTTAAGAAGTCAATCTATAACCCTGCCTCTCACATACACTGCCTCTCTGTCTATTCTCCTTCACGTCCCCATCAACTACTTCCTTGTCTCTGTGCTTAAGCTTGGAATCAAAGGCATTGCCTTAGGCGCTGTTTGGACGAATTTCAACCTCGTCTTTTCGTTGATTCTCTACATCTGGGTCTCCGGCGTATACAAGAAAACATGGCCCGGTGTTTCGTTGAAGGGCGTCTTCAGCGGTTGGAAATCGCTTTTGAATCTTGCAATTCCAAGTTGCATTTCCGTTTGCCTGGAGTGGTGGTGGTACGAAATCATGATTTTACTATGCGGGTTATTGATTAATCCCCAAGCAACGGTTGCATCAATGGGTGTTCTGATTCAAACCACTGCTCTGATATACATTTTCCCATCTTCCCTAAGCTTTGCCGTTTCCACACGTGTTGGAAATGAACTGGGTGCGGAGAATCCCAAAAAGGCAAAACTTGCAGCCCTCGTGGGGTTATGTTTCAGTTACGGTTTGGGTTTCTCGGCTTTGTTTTTCGCAGTTTCGGTGAGGCACGTGTGGGCTTCGATGTTCACAAGTGACGCGGAGATCATTGCTTTGACATCGATGGTGTTGCCCATCATTGGACTATGTGAACTTGGAAATTGTCCGCAAACAACGGTTTGCGGCGTTTTGAGGGGAACCGCAAGGCCCAAGTTGGGAGCGAATATAAATTTGGGTTGCTTCTATCTAGTGGGAATGCCCGTTGCGGTGAGGTTGAGTTTCTTTGCCGGCTTTGATTTCAAAGGCTTGTGGCTTGGTTTATTGGCAGCTCAAGCCTCTTGTATGTTCACCATGCTAATTGTGTTGGCTCGAACCAATTGGGAGGGTCAAGTTCAAAGAGCCAAAGAACTCACATCATCGTCTGATTCTAGTGAGGAGGAGGAGGAACAAGATCAGAAATGCTTGTTCAGTTCGGGCGCCACAAAGGAATGCTCTCATTCTGATTCATTAGTTTGA 1626 0.4717 MCQLSSPSTLCESNEGHPNMPPTKIHEEPDMFVLLIPKPPTTTTFFEQGQNNQKPHKTHFSLALDEVKCIANIALPMVLTGLLLYSRSVISMLFLGRVGELALAGGSLAIGFANITGYSILSGLAMGMEPICGQAFGAKRFKLLGLAMQRTMVLLLLTCVFISFLWFNMKKILVLCGQQEDIATEAQSFILFSIPDLVAQSLLHPLRIYLRSQSITLPLTYTASLSILLHVPINYFLVSVLKLGIKGIALGAVWTNFNLVFSLILYIWVSGVYKKTWPGVSLKGVFSGWKSLLNLAIPSCISVCLEWWWYEIMILLCGLLINPQATVASMGVLIQTTALIYIFPSSLSFAVSTRVGNELGAENPKKAKLAALVGLCFSYGLGFSALFFAVSVRHVWASMFTSDAEIIALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVRLSFFAGFDFKGLWLGLLAAQASCMFTMLIVLARTNWEGQVQRAKELTSSSDSSEEEEEQDQKCLFSSGATKECSHSDSLV* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1841 541 Pfam MatE 76 236 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso1g1841 541 Pfam MatE 298 459 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso1g1841 541 MobiDBLite consensus disorder prediction 505 524 - -
Gso1g1841 541 TIGRFAM matE: MATE efflux family protein 76 474 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso1g1841 541 MobiDBLite consensus disorder prediction 1 16 - -
Gso1g1841 541 PANTHER MULTIDRUG RESISTANCE PROTEIN 45 519 - -
Gso1g1841 541 MobiDBLite consensus disorder prediction 1 23 - -
Gso1g1841 541 CDD MATE_eukaryotic 66 503 IPR045069 GO:0042910|GO:1990961
Gso1g1841 541 PANTHER PROTEIN DETOXIFICATION 45 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1841 Gso-Chr1 55182344 55184354 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1841 K03327 - gmx:100811560 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1841 1 55182344 55184354 Gso1g1841 1 55182344 55184354 ECH