Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1835 ATGAAAGGTTCGAAGCGTTTGGCCGCGTCGGAACCCAACCAGATCGATACCAACGAAACGGGGTTCCGGAATAAAAGAATAATGGAAGGATCCCTCTTTGATGTCCATAGGGCCGAACCATCCCAACAACCAATTGTGGCAGCACCACCATTGGATATGAAACGGGCGGAGTCATCACAGCAGCATGTGAGAGCTTTAAATACCCAGTTTGCAAGTTGGGTTCAAACACAACTAAAGAATCATCCTGATGAGCTTTGGGAAGATGGTGTCAGAGATTACTTAGATCATGCTTCAAGCATTATGGAAAAGTTTAGTGATGTTGTCAACTGGCTCAAAGCAAATGCCACTAAGGCAGAAAATTCAGCTGCTGATGCTAGTGCTGCTTTTTCTGGGAAAAAGCTCTTGCCTGAAGTAATAATCAATGAAAATAAATCTTCTGGAGAAAAAACTGGGTCTACTCCTGTTAGTACTGCTACAAATTTTACTAGTTCTTGGAGCCCTGGATTATTTTCAAACAGTCAAGGCATTTTTGGAATTGGAAATCAAAGTTCGGCTATCTCTAATCAGAGTTTGTCTCCCTCTAATCAAAGTTTGGCTCCCTTTAACAACAATGCTTCAGATGATGTAGATGGTGAAAATGAGTTGGAGCAGCCTAGCAGCCCATCAGTTAAGAAGTCAGAAGAGAAAGGTGTAGTAGTTGTACATGAAGTAAAGTGCAAGCTTTATGTGAAGTCAAGTGATCCAGGAGATAAAGATGCATGGAAAGATAAAGGAATGGGCCAACTGTCTATTAAATGCAAAGAGGGTGTCAGCAAGGCTACCAAAGAGTCCAAACCTACAATTGTTGTTCGAAATGAGGTAGGAAAAGTTCTTCTCAACGCCCTGTTGTATCCAGGAATCAAAACAAATCTGCAGAAGAACTCTCTTGTTGCAATATTCCATACTTCGGGTAATGCTGACGGAAGTGGTGGAGATAACGATAGTGTTGTTGCACGTACATTCTTGATCCGGATGAAAACAGAAGATGATCGAAATAAACTGGCTTCAACCATCAAAGAATATGCTCCAATGTCTTGA 1077 0.416 MKGSKRLAASEPNQIDTNETGFRNKRIMEGSLFDVHRAEPSQQPIVAAPPLDMKRAESSQQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVNWLKANATKAENSAADASAAFSGKKLLPEVIINENKSSGEKTGSTPVSTATNFTSSWSPGLFSNSQGIFGIGNQSSAISNQSLSPSNQSLAPFNNNASDDVDGENELEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSSDPGDKDAWKDKGMGQLSIKCKEGVSKATKESKPTIVVRNEVGKVLLNALLYPGIKTNLQKNSLVAIFHTSGNADGSGGDNDSVVARTFLIRMKTEDDRNKLASTIKEYAPMS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1835 358 PANTHER RAN BINDING PROTEIN 5 356 IPR045255 -
Gso1g1835 358 MobiDBLite consensus disorder prediction 185 228 - -
Gso1g1835 358 Gene3D - 112 357 IPR011993 -
Gso1g1835 358 SMART ranbd_3 215 354 IPR000156 GO:0046907
Gso1g1835 358 ProSiteProfiles Ran binding domain type 1 profile. 225 358 IPR000156 GO:0046907
Gso1g1835 358 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 5 356 - -
Gso1g1835 358 SUPERFAMILY PH domain-like 225 355 - -
Gso1g1835 358 MobiDBLite consensus disorder prediction 185 208 - -
Gso1g1835 358 CDD RanBD_NUP50 227 355 - -
Gso1g1835 358 MobiDBLite consensus disorder prediction 1 22 - -
Gso1g1835 358 Pfam RanBP1 domain 223 353 IPR000156 GO:0046907
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1835 Gso-Chr1 55133290 55139777 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1835 K14295 - gmx:100788565 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1835 1 55133290 55139777 Gso1g1835 1 55133290 55139777 ECH