Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1830 ATGTATAATTTTTATAATCACCGTCGCGCTCAGTGTGTGTATATAAAAGAGAGAAGAGTAGAAGATGGCGAGATTGTATTGGGAGAGAGGATGGGTGCAGAAGCAAATGGCGGCGAGAAGCAATTGAAATTTCTGATCTACGGTCGCAGCGGTTGGATTGGTGGTCTACTGGGTAAGCTCTGCGAAGAGCGCGGGATCCAATATGAGTACGGCACCGGCAGATTGGAGAACCGGTCGTCGTTGGAGGCGGACATAGCGGCTGTGAAGCCCAGCCACGTGTTCAACGCCGCGGGTGTCACGGGTAGACCCAATGTGGACTGGTGCGAATCTCACAAAGTTGAAACCATCCGAACCAACGTCGTCGGCACTCTCACCCTCGCCGACGTCTGCCATCATAAAGGCCTCATCCTCATCAACTACGCCACCGGCTGCATCTTCGAGTACGATTCTTCCCACACTCTCGGATCCGGCATCGCCTTCAAGGAACACGATACTCCCAATTTCACCGGATCCTTCTACTCCAAGACCAAAGCCATGGTGGAGGATCTGGTTGGGAACTACGAGAACGTGTGCACGTTGCGTGTGAGGATGCCGATTTCGTCGGATTTGTCGAACCCGCGGAATTTCATCACTAAGATCACTCGATACGACAAGGTTGTCGACATTCCCAACTCCATGACCATATTGGACGAGCTTCTCCCAATCTCGCTGGAGATGGCCAAGCGGAACCTCACTGGGATCTGGAATTTCACCAACCCTGGAGTCGTAAGTCACAACGAGATTTTACAGATGTACAAGGAATACGTGGATCCGAACTTTACATGGAAGAACTTCACTCTGGAGGAGCAGGCTAAGGTGATTGTTGCCCCTAGAAGCAACAACGAGCTTGACGCCTCTAAGTTGAAGAAGGAGTTTCCTCAACTTTTGTCCATCAAAGACTCCCTCGTTAAGTATGTATTCCAGCCAAATCAGAAAAAGGCATAA 984 0.5041 MYNFYNHRRAQCVYIKERRVEDGEIVLGERMGAEANGGEKQLKFLIYGRSGWIGGLLGKLCEERGIQYEYGTGRLENRSSLEADIAAVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCHHKGLILINYATGCIFEYDSSHTLGSGIAFKEHDTPNFTGSFYSKTKAMVEDLVGNYENVCTLRVRMPISSDLSNPRNFITKITRYDKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILQMYKEYVDPNFTWKNFTLEEQAKVIVAPRSNNELDASKLKKEFPQLLSIKDSLVKYVFQPNQKKA* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1830 327 Pfam RmlD substrate binding domain 43 215 IPR029903 -
Gso1g1830 327 Gene3D - 33 327 - -
Gso1g1830 327 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 38 324 - -
Gso1g1830 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 41 319 IPR036291 -
Gso1g1830 327 CDD dTDP_HR_like_SDR_e 43 315 - -
Gso1g1830 327 PANTHER BNAC05G13120D PROTEIN 38 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1830 Gso-Chr1 55082089 55083356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1830 K12451 - gmx:100787499 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1830 1 55082089 55083356 Gso1g1830 1 55082089 55083356 ECH