Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1827 ATGGCAGCATCGTCTTCTTCTCCTTCAAAGGAGCCACAACTCAAGGACGAGGAGGATCGGGAACAAGAGGAACAACACCAACAGCCACAGCCAGTCAAAGAGTGCGTCCACAAAACCAAAACGATCCAGTTTCTCGGACGTACCACTCCGATCGTTCTTCAAAACGACAACGGACCCTGCCCGCTCCTCGCTATCTGTAATGTTCTGCTGCTGAGAAACAACTTAAATTTGAGTCCAGATATTGCTGAAGTCTCACAGGAGAAATTGCTTTCATTGGTTGCTGAACGATTAATTGATTCAAATAGTAATGTGAATAACAAAGATGCAGGCTATGTTGAAAATCAACAACAGAACATTGCTGATGCAATTGACTTACTCCCTAGGCTTGCTACTGGAATTGATGTAAATATAAAATTTAGGAGAATAGGTGATTTTGAATTCACTCGAGAGTGTGCCATATTTGATCTGCTGGACATTCCCTTGTATCATGGCTGGATTGTTGATCCTCAGGATTATGACACTGCGAATGCAATTGGATCAAAATCCTATAATTCCCTTATGGGAGAGCTTGTCTCTCTTGAAACACTAAACATGGAGGTCCATCATAAAAATAATCCAGAAGAAGATTGTGTTGATTTTGTGGCTGCAACAACTGCTACTCTTGGAGTTCCCTCTCCCAGTCTTTCAAAAGCCAGGTCGTTTGATGATTCTTCTCATTCTATTTCTGATCATATACAAAGAAAAGGTGATCTAGAAGAAGAGGCAGAGTTGTTGAGAGTCTTGAAAATGTCCGAGGATGAAAGTGATCCTGTTGTAGGTCACATGCATGGAGGAGAAATTTCTGTCAGTATGGATAGAAAAATGTGTAATGACGAGGTTATAAATATGGATTGTGGAGATAAATTAGGAAATAGCTCTGGTGCTGGTAACAGTAACTTTCATGAGCATGGCCCAGAGCCTTCCTTATCTGATGATTGTGCTGCTTCTGGCAAAGACCACAGCGAACAGATATCTTCTACTTCTACACTGGGAGAGGCAGCTAATTCATCCTTAAAGACTGATACCATAAGTGACCTTCATCAATCAACTTATACGGGACCTGAAGAATCTTTTGACCTGAATGATGTGATTGAGAAGAACAGCCTTGATGCATTGGTTCAGAATGAGAGTGAAGTTATCCCTTCTCCTGAAAAACACTCTGTCTCTTTGTTTGAGTGCCGTGCAGATTTTTCTGGAGGTGATGGAAAAGTCCATGATCAATCCACTCCTACAACTATAGATCATGAAGTTGTAGGTGAATCTCATGGACCTGATGCCACAGGATTATCATTCTCATCCCCTGGCCATACAAATTCAGATTCATCTAGTGTCAGATATCATCAAACTGATGTTTCTGGAGCATTGACTTCAAGTGTTCAAGGGAGTGAGCCCATATATGAAGGAGAGGAATGTGTATTGGATACAAGAACTGGAAATTTTGAGGATCGTGAACCTGTTTATGAAGGTGAGGTGGTACTTGCAGAACAGGCTGACAGAAGCACCTTAGTTGCTCCTGATCTAAGAGCTAAGGATGAACTTACTCCAGAACAAGGTGAATTGATCAAGAGTTTCTTGAGGAATAATGCCAGCCAGTTGACATTTTATGGTCTTTTCTGTTTACAAGATGGGCTTAAAGAGCGTGAGCTGTGTGTTTTTTTCCGTAACAATCATTTCAGCACCATGTTCAAGTTTGAGGGTGAGCTCTATCTTCTAGCCACGGACCAAGGTTACATAAATCAGCCTGATCTGGTCTGGGAAAAACTGAATGAGGTCAATGGTGATACATTGTTTATGACCGGTAATTTCAAGGAATTCAAGGTAGAAAACCATGAAAGTAGTACTTGGGATGAGAACAATGCTCTGACCAGCACTGCCGACTATCTTGCCAGCATAGATAGTGCAACACATGCAGGCTTAGATATCAATTCTGATCTCCAATTAGCAATAGCCTTGCAACAACAGGAGTTTGAGCAGCAGCCACCACGCCAGAATAATTCACAGCCGCAATCATCCATTAGTGGTAGCTCTAGACTGGTCACAGGTCCCCAGGTGGCAAGAAACACTGGAAGACATTCATCTTCATCAACATCTGCATCTCCCAGGTCTGATGCAAAATCCAAAGATAAATGTATAGTGATGTGA 2181 0.4191 MAASSSSPSKEPQLKDEEDREQEEQHQQPQPVKECVHKTKTIQFLGRTTPIVLQNDNGPCPLLAICNVLLLRNNLNLSPDIAEVSQEKLLSLVAERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFRRIGDFEFTRECAIFDLLDIPLYHGWIVDPQDYDTANAIGSKSYNSLMGELVSLETLNMEVHHKNNPEEDCVDFVAATTATLGVPSPSLSKARSFDDSSHSISDHIQRKGDLEEEAELLRVLKMSEDESDPVVGHMHGGEISVSMDRKMCNDEVINMDCGDKLGNSSGAGNSNFHEHGPEPSLSDDCAASGKDHSEQISSTSTLGEAANSSLKTDTISDLHQSTYTGPEESFDLNDVIEKNSLDALVQNESEVIPSPEKHSVSLFECRADFSGGDGKVHDQSTPTTIDHEVVGESHGPDATGLSFSSPGHTNSDSSSVRYHQTDVSGALTSSVQGSEPIYEGEECVLDTRTGNFEDREPVYEGEVVLAEQADRSTLVAPDLRAKDELTPEQGELIKSFLRNNASQLTFYGLFCLQDGLKERELCVFFRNNHFSTMFKFEGELYLLATDQGYINQPDLVWEKLNEVNGDTLFMTGNFKEFKVENHESSTWDENNALTSTADYLASIDSATHAGLDINSDLQLAIALQQQEFEQQPPRQNNSQPQSSISGSSRLVTGPQVARNTGRHSSSSTSASPRSDAKSKDKCIVM* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1827 726 MobiDBLite consensus disorder prediction 307 349 - -
Gso1g1827 726 MobiDBLite consensus disorder prediction 439 474 - -
Gso1g1827 726 MobiDBLite consensus disorder prediction 332 349 - -
Gso1g1827 726 PANTHER NF-E2 INDUCIBLE PROTEIN 2 726 IPR007518 GO:0004843|GO:1990380
Gso1g1827 726 MobiDBLite consensus disorder prediction 669 726 - -
Gso1g1827 726 Pfam MINDY deubiquitinase 66 190 IPR033979 GO:0004843|GO:1990380
Gso1g1827 726 MobiDBLite consensus disorder prediction 226 248 - -
Gso1g1827 726 MobiDBLite consensus disorder prediction 11 33 - -
Gso1g1827 726 MobiDBLite consensus disorder prediction 1 34 - -
Gso1g1827 726 MobiDBLite consensus disorder prediction 428 474 - -
Gso1g1827 726 MobiDBLite consensus disorder prediction 669 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1827 Gso-Chr1 55043420 55050338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1827 K01309 - gmx:100808340 1360.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1827 1 55043420 55050338 Gso1g1827 1 55043420 55050338 ECH