Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1822 ATGGGTACGGTGGCTCCAAGAGTTGAAAGCTTGGCGAGCAGCGGGATAAAGTGTATCCCGAAGGAATACGTGAGGCCTCAAGAAGAGCTCAAGAGCATAGGGAACGTGTTTGAGGAGGAAAAGAAGGAAGGGCTACAGGTTCCGACAATTGACTTGAGAGAGATAGATTCGGAGGACGAGGTTGTTCGAGGGAAATGTCGTGAGAAGCTGAAGAAAGCGGCGGAGGAGTGGGGTGTGATGCACTTGGTGAACCATGGGATCCCCGATGAGCTGATAGAGCGGGTGAAGAAAGCAGGGGAAACGTTCTTTGGTCTGGCGGTTGAGGAAAAGGAGAAGTACGCGAATGATTTGGAGTCTGGCAAGATTCAAGGCTATGGAAGCAAGCTGGCCAACAATGCCAGTGGCCAACTCGAGTGGGAAGATTACTTCTTCCACCTTGCTTTCCCTGAGGACAAGCGTGACCTCTCCTTCTGGCCAAAGAAACCCGCTGATTATATTGAGGTCACAAGCGAGTATGCAAAGCGACTGAGGGGGCTTGCGACCAAGATATTGGAGGCACTCTCTATTGGATTGGGGTTGGAAGGATGGAGGTTGGAGAAGGAAGTTGGTGGGATGGAAGAGCTTCTACTTCAATTGAAGATCAACTACTACCCTATTTGTCCCCAGCCAGAACTTGCTCTGGGAGTTGAAGCCCACACTGATGTGAGTTCACTCACTTTCCTCCTTCACAACATGGTGCCAGGTCTGCAGCTATTCTACGAAGGCCAATGGGTCACAGCAAAATGTGTCCCCGATTCCATTCTCATGCACATTGGTGACACCATTGAGATCCTGAGCAACGGCAAGTACAAGAGCATTCTTCATAGGGGGTTGGTGAACAAGGAAAAGGTTAGAATATCGTGGGCAGTGTTCTGTGAACCCCCCAAGGAGAAGATCATCCTGCAGCCACTTGCCGAGCTTGTCACTGAGACAGAGCCAGCACGCTTTCCACCTCGCACTTTTGCTCAGCATATTCACCACAAACTATTCAGAAAGGATCAGGAAGGTCTCCCAAATTGA 1059 0.5024 MGTVAPRVESLASSGIKCIPKEYVRPQEELKSIGNVFEEEKKEGLQVPTIDLREIDSEDEVVRGKCREKLKKAAEEWGVMHLVNHGIPDELIERVKKAGETFFGLAVEEKEKYANDLESGKIQGYGSKLANNASGQLEWEDYFFHLAFPEDKRDLSFWPKKPADYIEVTSEYAKRLRGLATKILEALSIGLGLEGWRLEKEVGGMEELLLQLKINYYPICPQPELALGVEAHTDVSSLTFLLHNMVPGLQLFYEGQWVTAKCVPDSILMHIGDTIEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKEKIILQPLAELVTETEPARFPPRTFAQHIHHKLFRKDQEGLPN* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1822 352 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 348 - -
Gso1g1822 352 Pfam 2OG-Fe(II) oxygenase superfamily 212 307 IPR044861 -
Gso1g1822 352 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 208 307 IPR005123 -
Gso1g1822 352 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 348 - -
Gso1g1822 352 Gene3D - 3 350 IPR027443 -
Gso1g1822 352 SUPERFAMILY Clavaminate synthase-like 6 344 - -
Gso1g1822 352 Pfam non-haem dioxygenase in morphine synthesis N-terminal 47 160 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1822 Gso-Chr1 55016060 55018139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1822 8 349 Glycosyltransferase AT5G59530 29.429 2.30e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1822 K05277 - gmx:547615 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1822 1 55016060 55018139 Gso1g1822 1 55016060 55018139 ECH