Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1820 ATGTCTTCTGATAGTGCAAAGGAAAATGCATCAGTAGTTGATTCATCAGTCACTGAAGGGAGGAATGACATTGGAAATTCAGATGATCCAGGTTACAAGTTTAATGAAAACATTAATACAACTAGGGCAGATAAAGGGGGACATTCTCATGGTCAGATAGGGCATCCTACAGGAATTGGAGTGGAAAAATGGCAAAATATAAAATACTTTATCATTAAGAGTTTGAACCATCAAAACATCCATTTGTCAATTGAGAAAGGAATTTGGGCTACTCAAATCATGAATGAACCGATTCTAGAAGAAGCTTTTCATAATTCAGGCAGTGTAATCCTTATATTTAGTGTCAACATGAGTGGTTCCTTCCAAGGGTATGCACAAATGATGTCCTCCATTGGAAGGGGGAGAGACAATGTTTGGAGTGAGGGAACTGGTAAAAGTAATCCTTGGGGTCGCAGTTTTAAGGTCAAATGGATGTGTTTGAATGATTTGCCTTTCCACAAGACACTGCATCTCAAGAATCCGTTGAATGACTATAAGCCTGTCAAAATTAGCAGAGATTGCCAGGAGTTATCTCCAGACATTGGTCTAGCTCTTTGTGAACTTCTTGATGGTAAGAATTATACAGATTGCCTGCCGACCAGTTTATCAAGGGATGAATTTTCTTTGAAAGGGCTTTATGCGAATACTCCAAGTTCAATGGGAGATGAAGACTGTAACTTTCCTCCACTGCATACATCGTGGTCAATGCCCTTGCCTTATTCTGCCTTGTTTTACCAAAATCAACCAGAAGTAAATAACTATCATTCAACAAACCAGAGAATCAGTGGGACAATGTTCACTGAAATATTGCCAACCACTTCTGAGTCATCACAAGTGTCAGGGATTAAACGTTCTAAGGATGTGGCTTCTCAATCTGATTTTTGGGGTCTATCTTCTGAAAGCCCTTTAGCTAGTACCCTAACTGAGGATGATTTTCTTGACATGTCCTATGAAGAATACCTGGAGGTCCATAGCAGATGCAAGAAACAGTTACGCACCAGTGCAACTAAACCATCTTGGAAACAACTGGAATTGTTGAGAAGTAATTCCCATGATGATGATAGGAATACAGAAGATGGGGTTGATAGAGACAGGAGCAACTCTCATGGGAGGATACATCAGTCATCTTTGCCATGGATATAA 1182 0.3976 MSSDSAKENASVVDSSVTEGRNDIGNSDDPGYKFNENINTTRADKGGHSHGQIGHPTGIGVEKWQNIKYFIIKSLNHQNIHLSIEKGIWATQIMNEPILEEAFHNSGSVILIFSVNMSGSFQGYAQMMSSIGRGRDNVWSEGTGKSNPWGRSFKVKWMCLNDLPFHKTLHLKNPLNDYKPVKISRDCQELSPDIGLALCELLDGKNYTDCLPTSLSRDEFSLKGLYANTPSSMGDEDCNFPPLHTSWSMPLPYSALFYQNQPEVNNYHSTNQRISGTMFTEILPTTSESSQVSGIKRSKDVASQSDFWGLSSESPLASTLTEDDFLDMSYEEYLEVHSRCKKQLRTSATKPSWKQLELLRSNSHDDDRNTEDGVDRDRSNSHGRIHQSSLPWI* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1820 393 ProSiteProfiles YTH domain profile. 67 202 IPR007275 GO:0003723
Gso1g1820 393 MobiDBLite consensus disorder prediction 358 393 - -
Gso1g1820 393 MobiDBLite consensus disorder prediction 1 52 - -
Gso1g1820 393 Gene3D ph1033 like domains 60 211 - -
Gso1g1820 393 PANTHER YTH DOMAIN-CONTAINING PROTEIN 1 7 309 - -
Gso1g1820 393 MobiDBLite consensus disorder prediction 32 46 - -
Gso1g1820 393 MobiDBLite consensus disorder prediction 359 383 - -
Gso1g1820 393 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 7 309 IPR045168 -
Gso1g1820 393 MobiDBLite consensus disorder prediction 1 23 - -
Gso1g1820 393 Pfam YT521-B-like domain 68 202 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1820 Gso-Chr1 54999968 55004412 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1820 K20100 - gmx:100784130 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1820 1 54999968 55004412 Gso1g1820 1 54999968 55004412 ECH