Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1810 ATGTCAGCAACCTTAACATGTAAACTAGGAGACAACAACCTAAGCTTAAACGATAAAAACGACCAACCCCCTTCACCTCCTCAGCCCCTACAAAAATGCCCTGCCAATATGGTTTCGATGGTGGTCTCAGAGCTAAGAATTCAACGAGGAATAGCCCTTCCAATGGTGGCCATGAATTTGGCTTGGTTTGCCAAGACAGCCATCACAACAGCATTTTTAGGCCGTCTTGGGGAGCTTAGTTTAGCAGGTGGAGCTCTCGGCTTCACTTTTGCTAATGTCACTGGCTTCTCTGTCCTCAATGGTCTATGTGGTGCCATGGAACCCATATGTGGACAGGCTCATGGTGCCAAAAACTTCAGGCTCCTTCACAAGACCCTTCTCATGGCAATCTCGTTGTTGCTATTGGTATCACTTCCCATCACTTTCTTGTGGCTTAATGTTGACAAGATTTTGATCCTTTTTGGCCAGCAACAAGACATCTCCACTGTTGCCAGGACCTATGTTTCATGTCTCATTCCTGACTTGTTTGTTGCCTCACTCTTCTGCCCCTTAAAAGCCTACTTGAGTTGTCAGAGCATAACTCTTCCCACCATGTTTAGTTCTGCTGTGGCACTAGCCTTCCACATACCAATTAACTTAGTGCTCTCAAGGACCATGGGCCTCAGAGGAGTTTCCATGGCAGTTTGGATAACTGATCTTATTGTCGTGGTTTTGCTAGCCATTTATGTTTTAATTCTTGAGAACAAAAAGGAAAGCATGTGGAAGGAAGGAGGGTGGTGGGATCAGAGCATTGAAGATTGGATAAGGCTGCTCAAGCTTTGTGGATCATGCTGCCTCAACACATGCCTTGAGTGGTGGTGTTATGAGATTCTAGTTTTACTTACTGGCCACCTCACAAATGCTAAGCAAGCAGTGGGAGTTTTGGCCATTGTGCTAAACTTCGACTATTTGCTTTTCTCAGTGATGCTGTCACTAGCCACTTGTGTTTCCACACGTGTCTCAAATGAGCTTGGTGCGAACCAAGCTGGTCTTGCTTACCGATCAGCATGTGTGTCTCTGGCATTGGGCTTTATCTCTGGTTGCATAGGTAGCTTGGTGATGGTGGCTGCCAGGGGAATTTGGGGGCCACTGTTTAGCCATGATATGGCAATTATAAAGGGAGTAAAGAAGACAATGTTGCTGATGGCTCTGGTTGAAGTGTTTAATTTTCCGCTGGCAGTTTGTGGAGGCATAGTTCGAGGGACAGCACGACCCTGGTTGGGCATGTACGCGAATCTAGGTGGATTTTATTTCCTTGCTCTGCCACTTGGTGTTGTTTTTGCCTTCAAGCTCTGTCTTGGGCTTGTTGGACTCCTCATTGGACTTCTGACTGGTATTGTTACCTGCTTGACGCTGTTATTGGTATTTATTGCGCGGTTAAATTGGGTGGAGGAAGCTGCCAAGGCACAAACACTAACAGGCCAAGAGCAGGTTAAGGAACTTTCCAAATATGACGCAGAAGAACGAATTGACGCCCATGAAAAAGATGTAGTGTAA 1536 0.4603 MSATLTCKLGDNNLSLNDKNDQPPSPPQPLQKCPANMVSMVVSELRIQRGIALPMVAMNLAWFAKTAITTAFLGRLGELSLAGGALGFTFANVTGFSVLNGLCGAMEPICGQAHGAKNFRLLHKTLLMAISLLLLVSLPITFLWLNVDKILILFGQQQDISTVARTYVSCLIPDLFVASLFCPLKAYLSCQSITLPTMFSSAVALAFHIPINLVLSRTMGLRGVSMAVWITDLIVVVLLAIYVLILENKKESMWKEGGWWDQSIEDWIRLLKLCGSCCLNTCLEWWCYEILVLLTGHLTNAKQAVGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANQAGLAYRSACVSLALGFISGCIGSLVMVAARGIWGPLFSHDMAIIKGVKKTMLLMALVEVFNFPLAVCGGIVRGTARPWLGMYANLGGFYFLALPLGVVFAFKLCLGLVGLLIGLLTGIVTCLTLLLVFIARLNWVEEAAKAQTLTGQEQVKELSKYDAEERIDAHEKDVV* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1810 511 PANTHER MULTIDRUG RESISTANCE PROTEIN 33 491 - -
Gso1g1810 511 MobiDBLite consensus disorder prediction 1 30 - -
Gso1g1810 511 MobiDBLite consensus disorder prediction 1 21 - -
Gso1g1810 511 Pfam MatE 277 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso1g1810 511 Pfam MatE 54 213 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso1g1810 511 PANTHER PROTEIN DETOXIFICATION 56 33 491 - -
Gso1g1810 511 CDD MATE_eukaryotic 44 481 IPR045069 GO:0042910|GO:1990961
Gso1g1810 511 TIGRFAM matE: MATE efflux family protein 54 451 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1810 Gso-Chr1 54911842 54913882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1810 K03327 - gmx:100804083 944.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1810 1 54911842 54913882 Gso1g1810 1 54911842 54913882 ECH