Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1801 ATGAATCGCGTTGCATTGCCCAAATCCATTGCCCAGCGTTTCAGAGGCATCCACCACAGCCCGCGGAACCAGTGGTGTAATAACAACCGTTGCGAAACGCAGGTCCAAAGTGCTGGGCCCGTGGCTTCTCTCCTCAAGTCCCGTTCCGTCATACGGTTCCGCGGGCCTGACACCCTCAAGTTCCTTCAGGGCCTGTTGACCAACGATGTACGGAGGTTGGGTGAGCCCGTTGGTGACAGAACCGAAAACTTGCCCACGCCCAACGTGCCTGCTACATCGTTTCCTCCTATCTATGCTGCTCTATTGACTCCTCAAGGAAGATTCCTCTACGACCTCTTTCTCTATAAGCCTCCCACGTGCGACACCAAGCTCGATGACACCGGCACTGGACCTGATTCCCAACCACACGAACCCTTTCATTTGTTTGCTGACGTCGATTCTTCTGTGTTGGATGAATTGTTGCAAACCCTCAACAAATACCGGTTGAGGTCAAAGGTTGAGATTGATGATGTCTCAAGTGATTTCTCGTGCTGGCAGCGTTATGGTGCTGGCCTTCTTGAGAAGACCTCACAAGTAGAAGAACCAGAAGCAGCCTCTGTAGGCTGGGGTGCTGGTGTGGATCGTACTGCAATGTCATCCTCTCAAGGGAGTGATCAAGGGTGGCAATGGTTTAAGGATCCCAGATTGGTCTGTCTTGGTTTCAGAGGGATCTTCCCGTCGAATATAACTCCACCTCTAATTGAGGTGGACAAAGAGACTGATGAACAGAATTTCCTTCTGTGGAGAATAGAGAAGGGAGTAGCAGAAGGATCAACTGAGATTCCAAAAGGTGAGGCAGTACCGCTTGAGTATAATCTTGCAGGCCTTAATGCAATTAGCTTTGACAAAGGTTGCTATGTCGGCCAAGAACTCATAGCTCGTACACATCACAGGGGGGTGATTCGTAAGCGGATAGTTCCTCTAAGGTTTCTAGATAACGATGGGAAAGAGTTGGTAAACAAAGTCATTCCAGGCTCAGAAGTAATGAACACTGCATCTGGCAAACAAGCTGGTACAGTGACTACTGCCCTAGGATGTCGTGGGCTGGGGCTCTTGCGACTAGAGGAAGAAGCTTTAAAGGGGTCGAGTGCCTTGTCCGTTCAGGGACAAGAGGATGTGAAGGTTGTCGCTAGTAGACCAGATTGGTGGCCTTCTGAATGGCTTCAAGATCATGGACAGCACGCTGCTTTTGCCTAG 1236 0.5016 MNRVALPKSIAQRFRGIHHSPRNQWCNNNRCETQVQSAGPVASLLKSRSVIRFRGPDTLKFLQGLLTNDVRRLGEPVGDRTENLPTPNVPATSFPPIYAALLTPQGRFLYDLFLYKPPTCDTKLDDTGTGPDSQPHEPFHLFADVDSSVLDELLQTLNKYRLRSKVEIDDVSSDFSCWQRYGAGLLEKTSQVEEPEAASVGWGAGVDRTAMSSSQGSDQGWQWFKDPRLVCLGFRGIFPSNITPPLIEVDKETDEQNFLLWRIEKGVAEGSTEIPKGEAVPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRIVPLRFLDNDGKELVNKVIPGSEVMNTASGKQAGTVTTALGCRGLGLLRLEEEALKGSSALSVQGQEDVKVVASRPDWWPSEWLQDHGQHAAFA* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1801 411 TIGRFAM ygfZ_signature: folate-binding protein YgfZ 257 322 IPR017703 -
Gso1g1801 411 SUPERFAMILY Folate-binding domain 40 313 - -
Gso1g1801 411 Gene3D Probable tRNA modification gtpase trme; domain 1 17 393 IPR027266 GO:0005515
Gso1g1801 411 PANTHER UNCHARACTERIZED 32 399 IPR045179 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1801 Gso-Chr1 54839517 54842680 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1801 K22073 - gmx:100804156 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1801 1 54839517 54842680 Gso1g1801 1 54839517 54842680 ECH