Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1792 ATGCGAGTGAAAGAGATGCACCCGCTGTGCTGTATCTCCCTCGAGAGTCCCGGAATCGGCAAATATTCCCCGGAGCGGGAGCCGGCGGCGCTTTTCCGAACCAGGAGCCTTCCGGCGGCTGGATCTCACGGCAATGCCGCTCAGGGATCGGAGACCACCGTCGCCGGCGTTCTCTACAAGTGGACCAATTACGGCAAAGGCTGGAGATCCCGCTGGTTCCTCTTGCGGAATGGCGTTCTCTCCTACGCCAAGATCCGCTGTCCGGAGAATCTCAACCTCCTCACTCCATCCGACGACGTTCGCCTCATCGGAGAGATTTCCACCAACCGTCTAGCACGAGTGGACAGCGCCGCCACCGTCACGCGACGGAAGCATCGCAAAGCTTCTTCTTCTTCTTCTTCTGGCGTAGTCCATCTCAAGATTTCGTCGTTTAGAGAGAGCAAGTCAGATGATCGGCGTTTCTATATATTTACAGCAACGAAGACCCTCCATCTGAGAACTGATTCAAGGAAAGATCGCGTGGCGTGGATACAAGCCTTGGTTTCAACACGTGGCCTGTATCCTCTTCAACCACTCAATGATCATCTCTTGCTTGCACCCAATGATATATCCTTGTCAACCGAGAGGCTTAAGACACGCTTGCTTGAAGAGGGTACCGGTGAGAACCTTGTAAAAGAGTGCGAGCAAATCATGCTCTCAGAGTTCTCCGAAATGCAAGGACAGCTTGAAGTTCTTTGTCAAGAGCGATCTAATTTGCTCGATACAATAAGGCAGTTAGAGGCAGCTAATACTGAGCCTGAGGCCTCTGCTATACACGATGGTGAATACCAATTAACAAAGAATGAGTTTTCAAGTCTTGGACGTGGAAAATATAGTGAATGTAGTACAACTGAATCATCTGATGATATTGAGAAACAAGAGATGGAGGAAGTGTCAGATGAAGATGAAATCTCATATTATGATACTAGAGAGTGTTTTACGGAGCCTGATTGCAAGTGTGAGTCAGCAGAAGCTATGAATCAAGTGGACAGGTGTAGGGAGGCCAACACACAATATACTGATACAGAGAACATTCATCCTGAGAAAATGGTGTGTAATTATAAGCACCCTCAGTTAGCAAGACGAAAAAAGCTTCCAGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAGGACAATGTGGGAAAAGATCTAACGAGAGTTTGTCTCCCGGTATACTTTAATGAGCCGATATCATCCCTACAAAAATGTTGTGAGGACTTGGAGTACTCTTATCTTCTGGATCAAGCTTATGAGTACGGAAAATCAGGAAACGGTCTCCTTCGGGCACTTTATGTTGCTGCCTTTGCAGTTTCCGGATATGCGTCATCTGAAGGTCGTAATTGTAAACCCTTTAATCCTTTATTAGGAGAAACCTACGAAGCTGATTACCCCGACAAAGGAATTCGCTTCTTTTCCGAGAAGGTCAGTCACCATCCAACTCTCATTGCCTGCCACTGCGAAGGTAGAGGATGGAAGTTTTGGGCTGACAGCAACATCCATTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGTGTTCTGACCCTAGAGTTTAGTGATGGTGAAATATTTCAGTGGAGCAAGGTCACCACCACGATCTATAATCTTATCCTTGGGAAAATATACTGTGATCATCATGGGAGCATGGATATACGCGGTAATCGTACATATTCATGCAGACTCAAGTTCAAAGAGCAGACGATCCTTGATCGAAATCCTCGCCAGGTGCATGGATTTGTCGAAGATGTAACGGGAAAAAGAGTTGCCACATTATTTGGCAAGTGGGATGACAACATGTATTATATGAGTGGTAATATAAATGTCAAGCCTAAAGATTTCACTTCAGCAAACGCATCCTTGTTGTGGAAAAGGACTATGCCATCTCCCAATCTCACCCGGTATAATTTGACACCATTTGCCATCACTCTGAATGAGCTTACTCCGGGACTGAAGGAGAAACTCCCGCCCACGGATTCCAGGCTCAGACCAGATCAACGGCATCTAGAGAATGGGGAATACGAGAAGGCCAATTTGGAGAAACAAAGGTTGGAAAAGCGGCAGAGAATGTCAAGGAAAATACAAGAAAGTGGTTGGAAGCCTAGATGGTTCCGAAGAGAAGGTGAAAATGGAACGTTTCGATACGTTGGTGGGTATTGGGAGGCGAGAGAGCATGGAAGATGGGACGGGTGCCCGAATATATTTGGTGAATTTAATGAAGACTCTACCGATCCGTTAGCTTTGCGAAGACGCTGA 2313 0.4656 MRVKEMHPLCCISLESPGIGKYSPEREPAALFRTRSLPAAGSHGNAAQGSETTVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRCPENLNLLTPSDDVRLIGEISTNRLARVDSAATVTRRKHRKASSSSSSGVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALVSTRGLYPLQPLNDHLLLAPNDISLSTERLKTRLLEEGTGENLVKECEQIMLSEFSEMQGQLEVLCQERSNLLDTIRQLEAANTEPEASAIHDGEYQLTKNEFSSLGRGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTRECFTEPDCKCESAEAMNQVDRCREANTQYTDTENIHPEKMVCNYKHPQLARRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCCEDLEYSYLLDQAYEYGKSGNGLLRALYVAAFAVSGYASSEGRNCKPFNPLLGETYEADYPDKGIRFFSEKVSHHPTLIACHCEGRGWKFWADSNIHSKFWGRSIQLDPVGVLTLEFSDGEIFQWSKVTTTIYNLILGKIYCDHHGSMDIRGNRTYSCRLKFKEQTILDRNPRQVHGFVEDVTGKRVATLFGKWDDNMYYMSGNINVKPKDFTSANASLLWKRTMPSPNLTRYNLTPFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANLEKQRLEKRQRMSRKIQESGWKPRWFRREGENGTFRYVGGYWEAREHGRWDGCPNIFGEFNEDSTDPLALRRR* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1792 770 Coils Coil 242 262 - -
Gso1g1792 770 Pfam Oxysterol-binding protein 389 743 IPR000648 GO:0008289
Gso1g1792 770 SUPERFAMILY PH domain-like 50 182 - -
Gso1g1792 770 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 4 340 - -
Gso1g1792 770 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 352 759 - -
Gso1g1792 770 SUPERFAMILY Oxysterol-binding protein-like 384 759 IPR037239 -
Gso1g1792 770 Gene3D - 685 744 - -
Gso1g1792 770 Coils Coil 686 715 - -
Gso1g1792 770 SMART PH_update 52 187 IPR001849 -
Gso1g1792 770 ProSiteProfiles PH domain profile. 51 185 IPR001849 -
Gso1g1792 770 Pfam Pleckstrin homology domain 56 180 - -
Gso1g1792 770 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 352 759 IPR000648 GO:0008289
Gso1g1792 770 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 340 IPR000648 GO:0008289
Gso1g1792 770 Gene3D - 475 647 - -
Gso1g1792 770 Gene3D - 47 185 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1792 Gso-Chr1 54712980 54723260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1792 K20456 - gmx:100819924 1570.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1792 1 54712980 54723260 Gso1g1792 1 54712980 54723260 ECH