Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1791 ATGAGCAGCCTCCCTACAACTCAAGGGAAACCCATCCCTGATGCCTCCGACTACAAGGGCCGCCCCGCCGAGCGGTCCAAAACTGGTGGCTGGACCGCATCCGCCATGATATTAGGAGGAGAAGTGATGGAGAGGTTGACAACACTAGGCATCGCGGTGAATTTGGTGACATATTTGACTGGGACCATGCATTTGGGTAATGCTGCCTCTGCCAACGTTGTAACCAACTTTTTGGGAACCTCCTTCATGCTCTGTCTGCTCGGTGGCTTCCTCGCCGATACTTTCCTCGGAAGATACCGCACCATCGCCATCTTCGCAGCCGTTCAAGCAACTGGTGTTACAATATTGACGATATCAACCATAATTCCGAGCCTTCACCCTCCAAAGTGCAACGGAGACACCGTGCCTCCTTGCGTGAGAGCAAATGAGAAACAGTTAACGGCACTTTATTTGGCGCTTTATGTAACGGCACTCGGCACCGGAGGTCTGAAATCGAGTGTTTCAGGGTTCGGTTCGGACCAGTTCGATGATTCGGACAACGACGAGAAGAAGCAGATGATAAAGTTCTTCAACTGGTTCTACTTCTTCGTGAGCATAGGGTCTCTGGCCGCAACCACGGTTCTTGTGTACGTACAAGACAACATAGGACGGGGTTGGGGTTATGGTATCTGCGCGGGTGCGATTGTGGTGGCGCTTCTCGTGTTCTTGTCGGGTACGAGGAAGTACCGTTTCAAGAAACGTGTGGGAAGTCCATTAACTCAGTTTGCGGAAGTGTTCGTGGCTGCTCTTAGGAAGAGGAACATGGAATTGCCCTCTGATTCATCATTGCTCTTTAATGACTACGACCCCAAGAAGCAGACACTGCCGCATAGCAAGCAGTTCCGTTTCTTGGACAAAGCTGCAATCATGGATTCATCAGAATGCGGAGGTGGAATGAAGAGGAAGTGGTATCTTTGCAACTTAACAGACGTGGAAGAAGTGAAAATGGTACTAAGAATGCTACCCATATGGGCCACCACCATCATGTTTTGGACAATCCACGCTCAAATGACCACATTCTCGGTAGCACAAGCGACAACCATGGACCGTCACATAGGAAAAACATTTCAAATCCCCGCGGCATCAATGACCGTTTTCTTAATTGGAACCATTCTCCTAACTGTCCCCTTTTACGACCGTTTCATTGTTCCCGTGGCAAAGAAAGTGCTCAAGAACCCACATGGGTTCACCCCTTTGCAACGCATTGGAGTTGGTTTAGTACTCTCAGTGATTTCCATGGTGGTAGGAGCACTAATAGAAATAAAGAGACTAAGATATGCTCAATCGCATGGTTTGGTGGATAAGCCAGAAGCAAAGATCCCAATGACCGTGTTTTGGTTGATCCCACAAAACTTCATTGTGGGGGCAGGGGAGGCATTTATGTACATGGGGCAGTTGAACTTTTTCCTAAGAGAGTGTCCCAAAGGGATGAAAACAATGAGCACGGGATTGTTCTTGAGCACACTCTCTTTGGGGTTTTTCTTTAGCACCTTGCTAGTGTCTATAGTGAACAAAATGACAGCACATGGTAGGCCATGGCTCGCAGATAATCTTAACCAAGGGAGGCTCTATGACTTTTACTGGCTTCTGGCTATATTGAGTGCTATAAATGTGGTGTTATACTTGGTTTGTGCTAAGTGGTACGTCTACAAGGAGAAGAGGCTTGCTGATGAGGGCATTGTATTGGAAGAAACAGATGATGCTGCTTTCCATGGCCATTGA 1761 0.4798 MSSLPTTQGKPIPDASDYKGRPAERSKTGGWTASAMILGGEVMERLTTLGIAVNLVTYLTGTMHLGNAASANVVTNFLGTSFMLCLLGGFLADTFLGRYRTIAIFAAVQATGVTILTISTIIPSLHPPKCNGDTVPPCVRANEKQLTALYLALYVTALGTGGLKSSVSGFGSDQFDDSDNDEKKQMIKFFNWFYFFVSIGSLAATTVLVYVQDNIGRGWGYGICAGAIVVALLVFLSGTRKYRFKKRVGSPLTQFAEVFVAALRKRNMELPSDSSLLFNDYDPKKQTLPHSKQFRFLDKAAIMDSSECGGGMKRKWYLCNLTDVEEVKMVLRMLPIWATTIMFWTIHAQMTTFSVAQATTMDRHIGKTFQIPAASMTVFLIGTILLTVPFYDRFIVPVAKKVLKNPHGFTPLQRIGVGLVLSVISMVVGALIEIKRLRYAQSHGLVDKPEAKIPMTVFWLIPQNFIVGAGEAFMYMGQLNFFLRECPKGMKTMSTGLFLSTLSLGFFFSTLLVSIVNKMTAHGRPWLADNLNQGRLYDFYWLLAILSAINVVLYLVCAKWYVYKEKRLADEGIVLEETDDAAFHGH* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1791 586 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 574 - -
Gso1g1791 586 Gene3D MFS general substrate transporter like domains 6 571 IPR036259 -
Gso1g1791 586 MobiDBLite consensus disorder prediction 1 27 - -
Gso1g1791 586 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
Gso1g1791 586 SUPERFAMILY MFS general substrate transporter 19 564 IPR036259 -
Gso1g1791 586 Pfam POT family 99 521 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso1g1791 586 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 574 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1791 Gso-Chr1 54708013 54711982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1791 3 577 Organic Solute Cotransporters AT1G12110 63.032 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1791 - - gmx:100819392 1122.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1791 1 54708013 54711982 Gso1g1791 1 54708013 54711982 ECH