Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1758 ATGGCTTCAGTTAAAAGGTGGCTTCCGCTCGAAGCTAATCCTGACGTCATGAATCAGTTCCTTTGGGGGCTTGGACTTCGAGAGGATGAGGCAGAATGCTGTGACGTTTATGGCTTAGATGAAGAGCTTCTGGAAATGGTTCCAAAGCCCGTTCTTGCCGTGCTTTTTCTTTATCCCATAACCACCCAGAGTGAAGAAGAGAGGTTGCAGCAGGAAAATGAAAAAAAGGAATATAACAGTAGAGTCTATTTTATGAAGCAAACTGTGGGTAATGCTTGTGGGACAATTGGGCTGCTTCATGCTCTTGGTAACTTGACTTCTGAAGTCAAGCTCGTTGAGGGGTCGTTCTTTGATAACTTTTTTAAATCTACTGCAAGCTTGGATCCATTGCAGCGTGCAACATTTCTTGAGAATGACAAAGAAATGGAAGTGGCTCATTTGGTGGCAGCAACTGCTGGTGATACAGAGGCATCAGACAATGCAACTGCACATTTCATATGCTTTGCTTGTGTGGATGATGAACTTTATGAGCTTGATGGAAGAAAGTCAGTGCCAATATCTCACGGTCCATCATCACCAAGTACTTTGTTAAGGGATGCAGCTAAAGCAATACAGAGCATGATCCAGAAAAATCCAGACTCCTTCAACTTCAATGTCATTGCCTTGTGTAAGAAATCCGGGTAG 684 0.4342 MASVKRWLPLEANPDVMNQFLWGLGLREDEAECCDVYGLDEELLEMVPKPVLAVLFLYPITTQSEEERLQQENEKKEYNSRVYFMKQTVGNACGTIGLLHALGNLTSEVKLVEGSFFDNFFKSTASLDPLQRATFLENDKEMEVAHLVAATAGDTEASDNATAHFICFACVDDELYELDGRKSVPISHGPSSPSTLLRDAAKAIQSMIQKNPDSFNFNVIALCKKSG* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1758 227 Coils Coil 61 81 - -
Gso1g1758 227 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 3 225 IPR001578 GO:0004843|GO:0006511
Gso1g1758 227 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 7 208 IPR001578 GO:0004843|GO:0006511
Gso1g1758 227 CDD Peptidase_C12_UCH_L1_L3 7 222 - -
Gso1g1758 227 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 3 225 - -
Gso1g1758 227 SUPERFAMILY Cysteine proteinases 5 225 IPR038765 -
Gso1g1758 227 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 9 26 IPR001578 GO:0004843|GO:0006511
Gso1g1758 227 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 47 59 IPR001578 GO:0004843|GO:0006511
Gso1g1758 227 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 87 104 IPR001578 GO:0004843|GO:0006511
Gso1g1758 227 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 159 170 IPR001578 GO:0004843|GO:0006511
Gso1g1758 227 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 175 185 IPR001578 GO:0004843|GO:0006511
Gso1g1758 227 Gene3D - 2 225 IPR036959 GO:0004843|GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1758 Gso-Chr1 54381453 54384787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1758 K05609 - gmx:100527755 457.218