Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1754 ATGGCTACAACAACAACCTCGTCTTTTGCCTTTCTGAAATCTCACACTCACACCAAAACATTGTTCACCCGCAGAAGCTACAAAGCCATAAAGGCTCAATCTCAAACTGATGTCCGAGAGGAACAAGTCGTGGTAGTGGGTGCTGGGATCGCGGGCCTTGCAACTGCTCTGTCCCTTCATAGGCTTGGAGTTCGGTCCCTGGTGCTGGAGCAGGCACAGTCACTTCGAACAGGTGGAACTTCACTCACCCTTTTCAAAAACGGATGGAGGGTGCTCGATGCAATTGGAGTAGCTAATGACCTCAGAACTCAATTCTTAGAAATTCAAGGGATGGTGGTGAAGTCCGTGGATGGGAGGGAACTACGCGCCTTCAATTTCAAACAAGAGGATCAAAGCCAAGAGGTACGTGCAGTGGAGAGGAGAGTGCTTTTGGAAACCTTGGCTAGTCAGCTACCTCGGGATACCATTCAATATTCTTCACAATTACAGAGGATTGAAGCCACTCCAAACGGGGATACCTTGTTGGAACTTGTGGATGGGTCTAAGCTGCTTGCAAAGATTGTGATAGGGTGCGATGGGATTCGATCACCAATAGCTAAGTGGATGGGGTTTCCTGAGCCAAAGTATGTTGGTCATTGTGCTTTCCGTGGACTTGCGTCTTATTCAGATGGACAACCTTTTGGACCAAGAGTGAATTACATCTACGGAAGAGGGTTGCGCGCTGGATTTGTTCCTGTTTCTCCAACCAAAGTTTACTGGTTCATCTGCTTCAATAGTCCATCTGCAGGTCCAAAAATAACTGATTCATTGGAGCTGAAGAAGCAAGCTAAGGAACTGGTGAAGAATTGGCCTTCAGAGCTATTGAACATAGTGGATTCTACGCCGGATGACACTGTCATTAAGACTCCATTAGTAGATAGGTGGCTTTGGCCAGCCATAAGTCCTTCTGCTTCTGCAGGAAGAGTTGTGGTGGTTGGAGATGCATGGCATCCAATGACCCCAAATCTTGGGCAAGGAGCTTGTTGTGCACTTGAGGATTCAGTGGTTCTTGCTAAAAAGCTTGCCAGAGCCATCAATTCTGAAGACCCATCTGTGGAAGAAGCTTTCAGGTCATATGGCGCTGAAAGATGGCCCCGTGTATTTCCACTAACCATTCGTGCAAACCTCGTAGGTTCCGTTTTGCAGTGGGAGAACCCATTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTCAGGCTCGGGCCATTGCTGGAGCATACAAATTTTACTTGTGAGGGTCTATAA 1293 0.4718 MATTTTSSFAFLKSHTHTKTLFTRRSYKAIKAQSQTDVREEQVVVVGAGIAGLATALSLHRLGVRSLVLEQAQSLRTGGTSLTLFKNGWRVLDAIGVANDLRTQFLEIQGMVVKSVDGRELRAFNFKQEDQSQEVRAVERRVLLETLASQLPRDTIQYSSQLQRIEATPNGDTLLELVDGSKLLAKIVIGCDGIRSPIAKWMGFPEPKYVGHCAFRGLASYSDGQPFGPRVNYIYGRGLRAGFVPVSPTKVYWFICFNSPSAGPKITDSLELKKQAKELVKNWPSELLNIVDSTPDDTVIKTPLVDRWLWPAISPSASAGRVVVVGDAWHPMTPNLGQGACCALEDSVVLAKKLARAINSEDPSVEEAFRSYGAERWPRVFPLTIRANLVGSVLQWENPLVCSVRNNIVIPKLVRLGPLLEHTNFTCEGL* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1754 430 Pfam FAD binding domain 42 379 IPR002938 GO:0071949
Gso1g1754 430 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 26 428 IPR044560 -
Gso1g1754 430 SUPERFAMILY FAD/NAD(P)-binding domain 42 408 IPR036188 -
Gso1g1754 430 Gene3D - 41 409 IPR036188 -
Gso1g1754 430 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 42 64 - -
Gso1g1754 430 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 184 199 - -
Gso1g1754 430 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 319 334 - -
Gso1g1754 430 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 334 350 - -
Gso1g1754 430 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 26 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1754 Gso-Chr1 54338755 54341188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1754 41 427 Miscellaneous Gene Families AT5G05320 33.835 2.40e-80 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1754 - - gmx:100787671 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1754 1 54338755 54341188 Gso11g0320 11 2707659 2710786 GST