Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1739 ATGGATTTCACGGAGAAGGATCTATTCGGCGAAGATTCCGACAACGACAACGGGTCCCACTCCTCCGGTTCCTCTTCTTCTTCCTCCGTCGCTTCCTCTTCCTCATCGTCCTCCGGTTCCTCTTCTGCCTCTTCCTCCAAAGCCAGCGACGCCGCCGCCGACTCCTCCTCCGCCAGCGGCAGCGCCAGCAGCGGCGCCGAAGACGACGACGAGAATGGCGACGTCGTAGATAGCGCCAAGGCCCGCGCGCATCACCATCACGACTACGAAGACAAAGATCTGTTTGGCTCCGATAACGAAGATTACTGTAAAACCCTCGCTAGAAGTCCTTACCCCATTCCTGTATTGCCTGCCACCCGCAATGTGAATAATCAGGGTAGAGGGGGCTTTGGCCGTGGTCGTTGGCAAAATGATAGAGGAGCTGGCCTTCTTCCTCGTCCTGGACCATATCCCCAGAGGCAGAATTTTGGGTACGGAAATAGGTTTCAGAATGGCCGCCATGATGAGCGATTTGTCTCTGAGTTGAAGCTTTCAAAAAGTGAAGAAACTCTATCACGAAAGTGCATTGCTTTTCAGGAGCCTTGTGAAGTTGCTTGTTATAGTCGTGTCGAAGGCGGAGAAGTATACTTTGACGATCGTAGTTTGAGACTTTTTAAGCGCCATATTACTGAGGATGTTGGAGCTGATTTGAATGAAGGTTATGATACATACATTCCCAAAAAAGACTTAGGCTCAGAGGGCTTTGGCGATCTTCTTGCTTGCATTAGAGACAAAAATATCCCTCTTCAAAACATTCATTTTGTGACATTCCGTAATAACCTTAACAAGATACTGGCAACAGCTTATATCCGTCATGAGCCTTGGGAAATGGGAGTGCACAAAAGGAATGGTGTTGTCTATCTTGATGTGCATAAATTACCAGAAAGACCTCAAAGTGATTTAGATCGCAGGAGATGTTATGTAGGATATTGTTTTGAGAGCCTTGCAACCGAAGATCCTAATAGAGCAGATGGAGAGGGAATACATCATGTTGATGCCAATGCTGAATTCTGTGCCGTGATTAAGACAAAGTTAGGAGCTCACCGCATATTAATGGGTGCTGAGATGGATTGCTGTGATTCAACTAATGAAGGAAAGAGATTTTATGTGGAGTTAAAGACAAGTTGTGAGTTAAATTATCACACCGAGGAAAGATTCGAGAGGGAGAAACTGTTGAAGTTTTGGATTCAGTCATTCCTGGCAGGTGTTCCATATATTGTCATAGGATTTAGGGATGATGCAGGTCGTCTAGTTCGGACAGAGAGGCTTAGAACCAAAGATATAACACAGAGAGTGAAAATGAAGAACTACTGGCAGGGAGGAGTCTGCTTGGCGTTTGCTGATGAGGTATTATGCTGGCTGTATGGAACAGTCAAAGAAGGTGAAGATTATATTTTGCAGTTTGCTCCACCTTTCAACCGTTTAGAGCTTCTGCAAGCTCAGTCTTGCCCAGATGTAATTACTAGTCATCTGGAGCTTTTCTGA 1524 0.46 MDFTEKDLFGEDSDNDNGSHSSGSSSSSSVASSSSSSSGSSSASSSKASDAAADSSSASGSASSGAEDDDENGDVVDSAKARAHHHHDYEDKDLFGSDNEDYCKTLARSPYPIPVLPATRNVNNQGRGGFGRGRWQNDRGAGLLPRPGPYPQRQNFGYGNRFQNGRHDERFVSELKLSKSEETLSRKCIAFQEPCEVACYSRVEGGEVYFDDRSLRLFKRHITEDVGADLNEGYDTYIPKKDLGSEGFGDLLACIRDKNIPLQNIHFVTFRNNLNKILATAYIRHEPWEMGVHKRNGVVYLDVHKLPERPQSDLDRRRCYVGYCFESLATEDPNRADGEGIHHVDANAEFCAVIKTKLGAHRILMGAEMDCCDSTNEGKRFYVELKTSCELNYHTEERFEREKLLKFWIQSFLAGVPYIVIGFRDDAGRLVRTERLRTKDITQRVKMKNYWQGGVCLAFADEVLCWLYGTVKEGEDYILQFAPPFNRLELLQAQSCPDVITSHLELF* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1739 507 PANTHER BNAC01G10220D PROTEIN 19 506 - -
Gso1g1739 507 MobiDBLite consensus disorder prediction 117 136 - -
Gso1g1739 507 MobiDBLite consensus disorder prediction 75 95 - -
Gso1g1739 507 MobiDBLite consensus disorder prediction 15 66 - -
Gso1g1739 507 Pfam RAI1 like PD-(D/E)XK nuclease 369 431 IPR013961 -
Gso1g1739 507 MobiDBLite consensus disorder prediction 1 95 - -
Gso1g1739 507 PANTHER DOM-3 RELATED 19 506 IPR039039 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1739 Gso-Chr1 54213195 54217944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1739 K14845 - gmx:100798780 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1739 1 54213195 54217944 Gso1g1739 1 54213195 54217944 ECH
Gso1g1739 1 54213195 54217944 Gso11g0335 11 2811005 2815863 GST