Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1727 ATGTCAAGAACTGTAGAGATGACAATTTTGTCCGCAGAAAACCTCCAAATGAATAGAAAATCCATTAGAGGAAGCACATTTGTGACGGTTCAATCCGACACTAGCAGCGACACAAGTGCTGCTACCAAAGTGGATTCAGAGGGTGGAAGTTACCCTTCGTGGAATGAGAAGGTTGTGATGGACGTGCCATTGCATGCAAGGTTCATAACCGTTGAAGTGAAGTGCAAAACGTCATCATCAGGGTCTAACAGTGTTGGCGTGGCACAAATTCCGGTTTCTGATTTCATTGGAGGGTATATGCCCGAAAACCAATTGCATTTCTTGAGCTATAGGTTGTGGGACGGCAAAGTTAGGAGAAATGGGGTTATAAACATTTCGGTGAGGGTGAAAGTGGCTGAACATTCTTCTTGTAATTTGAATTCTATGTCATTGTCAGCGGTAACTGGGGTGCCGGTGGCCGGTAATGGCCCCACTGGAGTTGTCACAGGGATTCCAGCTGTTTGGTTAAACTACCAAAGAAATCTTTGA 528 0.4489 MSRTVEMTILSAENLQMNRKSIRGSTFVTVQSDTSSDTSAATKVDSEGGSYPSWNEKVVMDVPLHARFITVEVKCKTSSSGSNSVGVAQIPVSDFIGGYMPENQLHFLSYRLWDGKVRRNGVINISVRVKVAEHSSCNLNSMSLSAVTGVPVAGNGPTGVVTGIPAVWLNYQRNL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1727 175 Pfam C2 domain 4 99 IPR000008 -
Gso1g1727 175 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Gso1g1727 175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 128 IPR035892 -
Gso1g1727 175 SMART C2_3c 4 104 IPR000008 -
Gso1g1727 175 PANTHER INGRESSION PROTEIN FIC1 4 134 - -
Gso1g1727 175 PANTHER - 4 134 - -
Gso1g1727 175 Gene3D C2 domain 3 130 IPR035892 -
Gso1g1727 175 CDD C2_SRC2_like 4 125 IPR044750 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1727 Gso-Chr1 54039278 54040508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1727 - - gmx:100500298 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1727 1 54039278 54040508 Gso11g0350 11 3012068 3013177 GST