Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1712 ATGAAGAGCTCATCATATTATTTCAGTGATATATTATCCCTACAACGTAATAATAACCAAAACAGCAGAGAGAAGAGAAGGTGTAGACAAACACAATCTCTAATGGCACTCAGGATGTGGGCTTCTTCCACTGCCAATGCACTCAAAGTCTCTTCTGCCTCCAGACCTCATCTCTTGCATCCTTTTTCTTTCTCCAGATGCTTGTCTTCCGTCTTGGATGGACTTAAGTATGCAGATTCACACGAATGGGTCAAGCACGAAGGCTCAGTCGCCACCATTGGTATCACTGACCATGCCCAGGACCATCTTGGAGAGGTTGTGTATGTGGAGCTGCCAGAATCAGGTGGCACAGTTACCCAGAAGTCTGGCTTCGGAGCCGTTGAAAGTGTTAAAGCAACAAGTGACATAAACTCTCCAATCTCGGGGGAGATTGTTGAGGTTAACAAAAAGCTCACAGAGACGCCTGGCCTGGTCAACTCAAGCCCATACGAAGATGGATGGATGATCAAAGTAAAGCCAAGTGATCCATCTGAATTAGATTCCTTGATGGGTCCAAAAGAGTACACAAAATTTTGTGAAGAAGAAGATGCTAGTCATTAA 600 0.445 MKSSSYYFSDILSLQRNNNQNSREKRRCRQTQSLMALRMWASSTANALKVSSASRPHLLHPFSFSRCLSSVLDGLKYADSHEWVKHEGSVATIGITDHAQDHLGEVVYVELPESGGTVTQKSGFGAVESVKATSDINSPISGEIVEVNKKLTETPGLVNSSPYEDGWMIKVKPSDPSELDSLMGPKEYTKFCEEEDASH* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1712 199 Gene3D - 69 199 - -
Gso1g1712 199 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 35 199 - -
Gso1g1712 199 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 115 144 IPR003016 -
Gso1g1712 199 TIGRFAM gcvH: glycine cleavage system H protein 73 196 IPR017453 GO:0005960|GO:0019464
Gso1g1712 199 SUPERFAMILY Single hybrid motif 71 194 IPR011053 -
Gso1g1712 199 ProSiteProfiles Biotinyl/lipoyl domain profile. 90 172 IPR000089 -
Gso1g1712 199 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 35 199 IPR002930 GO:0005960|GO:0019464
Gso1g1712 199 Hamap Glycine cleavage system H protein [gcvH]. 72 193 IPR002930 GO:0005960|GO:0019464
Gso1g1712 199 Pfam Glycine cleavage H-protein 75 194 IPR033753 -
Gso1g1712 199 CDD GCS_H 77 171 IPR033753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1712 Gso-Chr1 53875939 53877701 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1712 K02437 - gmx:100306654 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1712 1 53875939 53877701 Gso11g0362 11 3122167 3123935 GST