Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1710 ATGGTTCCCAAAGTTTATGCTGGTCAAGAAATGGCAATGGTTGAGAATGAGAATTGCATAATGAATGGGAAGTGGAAGAAACGTGTGCATGTTTTTGGTGAGAGGGTGATGAGATTTCCTAACAAGGCTTGGCAGACAACGTGGAAGGTGGGACGTGAAGACCCAAGAAGGTTGATCCATGCATTTAAAGTGGGTTTGTCTCTAACTCTTGCTTCTTTGTTGTATTTGTTGGAGCCACTTTTCAAGGGGATTGGACAGAGTGCTATTTGGGCTGTCATGACCGTGGTTGTTGTGTTGGAATTCACTGCAGGGGCAACTTTATGCAAAGGGCTCAACAGAGGATTGGGGACACTGTTAGCAGGATTATTGGCATTTCTTGTTGGGTATATTGCAAATGCATCTGACCGAGTCTCTCAAGCTATTATCATCGGAGCTGCAGTTTTTTTTATAGGAGCTCTAGCTACTTATATGAGGTTTATTCCCTATATAAAGAAGAATTATGACTATGGTCTAGTTATATTTCTCTTGACTTTCAACCTGATTACTGTGTCGAGCTACCGGCTTGAAAATGTCTTGAAAATTGCACATGATCGCGTATACACCATTGCCATAGGCTGTGCTGTTTGCCTTCTGATGAGTCTACTGGTATTTCCAAACTGGTCAGGAGAAGATCTGCATAATTCCACGGTTTACAAGCTCGAAGGCCTTGCCAAATCTATAGAAGCTTGTGTGAATGAGTACTTTTACGGAGAAATTGAAGGCTCTGGATATATGAAATTATCAGAGGATCCAATATACAAAGGTTATAAGGCTGTTTTGGATTCAAAATCCATTGATGAAACACTGGCATTGCATGCAAGTTGGGAGCCAAGGCATTCGAGGTACTGTCATAGGTTTCCATGGCAGCAGTATGTAAAAGTCGGAGCTGTTCTTCGTCAATTTGGTTATACTGTGGTAGCTTTACATGGCTGTTTGAGAACAGAAATTCAGACACCTAGATCAGTTAGAGCCATGTTCAAGGACCCCTGCATTCGGCTGGCAGCAGAGGTATCCAAAGTACTGATAGAACTTTCGAACAGCATAAGGAATCGCCGTCATTGCTCTCCAGAAATACTCTCTGATCATCTGCACGAAGCCTTACAGGACCTCAACACTGCCATAAAATCTCAACCTCGCCTCTTCTTAGGCCCCAAGCACAGGCACAACCAAGCCACCAACATGCTCAAAATAGCTGCTGCACAAGTTGGACAAGAAAGACATGGAAAGACCTCCCTATCAAGTGTTAAAACTGATTCTTCAGCATTGCTGGAATGGAAGACCAAAAGGGTTTCTGCCGAACAGACAAAGGAATCAGAACGCAAGTCTTTAAGGCCACAACTGAGTAAAATTGCAATCACTAGCCTTGAGTTCTCTGAAGCTCTTCCTTTCGCCGCCTTTGCGTCTTTGCTCGTGGAAACAGTGGCTAAACTGGACCTTGTCATAGAGGAAGTTGAGGAACTGGGGAGACTAGCATGCTTTAAAGAGTTCATACCCGGGGATGAGTTTGTTGTCACTTGTCAGGAGCCTCGAGTCGACGTGTCACAGAACCATTTACCTTCTCATGGAGTGGACTAA 1614 0.438 MVPKVYAGQEMAMVENENCIMNGKWKKRVHVFGERVMRFPNKAWQTTWKVGREDPRRLIHAFKVGLSLTLASLLYLLEPLFKGIGQSAIWAVMTVVVVLEFTAGATLCKGLNRGLGTLLAGLLAFLVGYIANASDRVSQAIIIGAAVFFIGALATYMRFIPYIKKNYDYGLVIFLLTFNLITVSSYRLENVLKIAHDRVYTIAIGCAVCLLMSLLVFPNWSGEDLHNSTVYKLEGLAKSIEACVNEYFYGEIEGSGYMKLSEDPIYKGYKAVLDSKSIDETLALHASWEPRHSRYCHRFPWQQYVKVGAVLRQFGYTVVALHGCLRTEIQTPRSVRAMFKDPCIRLAAEVSKVLIELSNSIRNRRHCSPEILSDHLHEALQDLNTAIKSQPRLFLGPKHRHNQATNMLKIAAAQVGQERHGKTSLSSVKTDSSALLEWKTKRVSAEQTKESERKSLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDLVIEEVEELGRLACFKEFIPGDEFVVTCQEPRVDVSQNHLPSHGVD* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1710 537 Pfam Aluminium activated malate transporter 48 501 IPR020966 GO:0015743
Gso1g1710 537 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 532 - -
Gso1g1710 537 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1710 Gso-Chr1 53849901 53853776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1710 1 509 Miscellaneous Gene Families AT4G17970 63.736 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1710 - - gmx:100819748 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1710 1 53849901 53853776 Gso11g0365 11 3144177 3147331 GST