Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1703 ATGGAACTGTTGTCTCTGAGACTCACCCCTTCACCTTCGAGTTCGACTTCATCGCTTCCTGCAGCACTTGCTCACTGCTCCAAGCTATGTGAATTTCAGCCGAGGAAGAAGAAGAAGGCGTGCTTCGACGCGCCTAGGCTTGCGGTGCGGTGTGTGAAGGCCTCGGCGGAGCGAACCGGTGATACGATCGATGATGGGGAGGCTCGTAGCGGGTTCACCACACCTGCCATGGAAGTCACCACATTCAATCGAAGCACTTTCAGCGATGCTGCTGACTTTCCCGTTTGGGAAAAGATTGGTGCTGTCGTCAGACTCAGTTATGGTATCGGGATTTATGGTGCCATGGCTGTTGCGGGGAGTTTTATATGTTCAATCACGGGAATTGACTCTCTGGGTGGTTTCCATCTATCGTTAGATGCCATTTTGGAAGGGCTTGGATATGCAGCTCCTCCAATTATGGCACTTTTGTTTATACTCGATGATGAAGTTGTGAAGCTATCACCCCATGCCCGTGCCATCAGAGATGTAGAGGATGAAGAACTGTGGAGCTTTTTCTATGGGATGTCCCCTTGGCAGTTTATACTGATGGTTGCAGCAAGTTCAGTTGGAGAGGAGCTCTTCTACAGGGCTGCTGTTCAGGGGGCATTGGCTGATATATTTTTACGAGGCAGTAATCTTATAACAGATGTTCAAGGAATGGCATCATTGACCGGTGTGCTGCCTCCATTTGTTCCATTTGCTCAAGCATTTGCGGCTGTTCTTACAGCTGTCCTTACTGGTTCTCTCTATTACATGGCTGCCTCTCCTAAAGATCCTACTTATGTTGTTGCACCTGTTTTACAATCTCGCTCTGGTCGCCAAGATTTGAAAAAGCTATTTGAAGCCTGGTATGAAAAACGGCAAATGAAAAAAATCTATTCCCCACTTCTGGAAGGACTGCTGGCACTATACCTAGGTTTCGAGTGGATCCAAACTGATAATATTCTTGCTCCCATTATCACACATGGCATATATTCCACTGTGATATTGGGACATGGCCTTTGGAAGATAAATGACCACCGGCGTAGACTACGTCAAAGAATCCAACAGCTCAAGTCAGAAGAAAAAAACTCCAACTAG 1119 0.471 MELLSLRLTPSPSSSTSSLPAALAHCSKLCEFQPRKKKKACFDAPRLAVRCVKASAERTGDTIDDGEARSGFTTPAMEVTTFNRSTFSDAADFPVWEKIGAVVRLSYGIGIYGAMAVAGSFICSITGIDSLGGFHLSLDAILEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDVEDEELWSFFYGMSPWQFILMVAASSVGEELFYRAAVQGALADIFLRGSNLITDVQGMASLTGVLPPFVPFAQAFAAVLTAVLTGSLYYMAASPKDPTYVVAPVLQSRSGRQDLKKLFEAWYEKRQMKKIYSPLLEGLLALYLGFEWIQTDNILAPIITHGIYSTVILGHGLWKINDHRRRLRQRIQQLKSEEKNSN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1703 372 Pfam Type II CAAX prenyl endopeptidase Rce1-like 190 340 IPR003675 GO:0004222|GO:0016020|GO:0071586
Gso1g1703 372 Coils Coil 347 372 - -
Gso1g1703 372 PANTHER OS03G0100030 PROTEIN 1 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1703 Gso-Chr1 53747542 53750740 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1703 - - gmx:100818224 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1703 1 53747542 53750740 Gso1g1703 1 53747542 53750740 ECH
Gso1g1703 1 53747542 53750740 Gso11g0374 11 3226990 3230504 GST