Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1320 ATGGTCCCAAAACCAATCTTAGTCACAACACCACCGCCGGCAACTTCTGCACCCTCTCCACCGCTCAACGCAGTTTCACCCCTCAAAACAGAAGAAAAACCCCAAACACAAACCCTAAAAACCCCCACCACCACCACTCAAAAAGCTATAACCAAACCAAGCCCATCATCATCCACCACCAAAACGACGCCGCAGCAGCGCGTGGAGCTAAAGAGAAAAACAAACTCATGGGTCCCCGCACTAATGCTAAACGCATTCGACGACATCATCAACAACTTCATAGACCCTCCACTCAAACCCTCCATAGACCCTCGCCACGTGTTGTCACAAAACTTCGCCCCCGTCCACGAGCTTCCTCCGACGGAGTGTGAAGTCATTGAAGGCTCTCTCCCACCGTCCCTCGACGGCGCCTACATCCGAAACGGCCCCAACCCCCAGTTCCTCCCGCGTGGGCCCTACCACCTCTTCGACGGCGACGGCATGCTCCACGCGCTTCGCATCTCCCATGGCAAAAAACCCACGCTCTGCAGCCGCTACGTTAAAACCTACAAATACACCATGGAAAACGACGCCGGTTTCCCTCTCATCCCCAACGTGTTCTCCGGCTTCAACTCCCTCGTGGCCTCCGCGGCACGTGGCTCCCTCTCCGCTGCACGTTTCTTAACGGGGCAGTTTAACCCCGCTAACGGCATTGGCCTGGCCAACACCAGCTTAGCCTTCTTCGGGAATCGTCTCTTCGCGCTTGGCGAATCCGACCTCCCTTACGTCGTTAACGTAACCCCTGACGGCGACATCGAAACCCTCGGCCGTCACGACTTTGACGGAAAACTCACGTTCAGCATGACGGCGCACCCTAAGATAGACCCCGACACAGCGGAGTGCTTCGCCTTCCGTTACGGCCCCGTGCCACCGTTCCTCACCTACTTCCGTTTCGACGGTAACGGCAAAAAACACGAGGACGTTCCTATTTTCTCCATGCTAACACCTTCGTTCCTCCACGATTTCGCCATTACGAAGAAATACGCGATCTTCTGTGATATTCAGCTCGGATTGAACCCTCTTGACATGATCTCCGGTGGCTCCCCCGTCGGCTCCGTCGCCTCCAAGGTCCCAAGGATCGGAATCCTCCCTCGTGATGCTAAGGATGAGTCGATGATGAAGTGGTTTGAGGTGCCGGGGTTCAACATCATTCACGCGATAAACGCGTGGGAGGAGGACGAGGGAAGAACGGTGGTGCTGGTGGCGCCGAATATTCTTTCGATGGAGCACGCGCTGGAGAGAATGGAGCTAGTTCACGCGATGGTGGAGAAGGTTCGGATCGAGCTGGACACGGGGATAATCACGCGGCAACCGGTGTCGGCGCGGAATCTCGATTTCGCAGTTATAAACCCTGCGTTCGTGGGGAAGAAGAACAGGTTCGTTTACGCGGCGGTGGGGGACCCAATGCCGAAGATCTCGGGGGTGGTGAAACTCGACGTGTCGAAGGGGGAGGAGCGGAGGGACTGCACGGTGGGGTGCAGGATGTACGGCGAGGGTTGCTACGGCGGAGAACCGTTCTTCGTGGCGAGGGAAGAAGGGGGCGAGGAAGATGATGGGTACTTGGTGAGTTACGTGCACGATGAGAGGAAGGGGGAGTCGAGGTTTTTGGTGATGGACGCGAAGTCGCCGGAGCTAGATGTTGTGGCGGCGGTGAGGCTTCCGCGGCGGGTGCCGTACGGGTTCCATGGGCTGTTTGTGAAGGAGAGTGAGCTGAGGAAAGTGTCGTTGTCGTGA 1773 0.5697 MVPKPILVTTPPPATSAPSPPLNAVSPLKTEEKPQTQTLKTPTTTTQKAITKPSPSSSTTKTTPQQRVELKRKTNSWVPALMLNAFDDIINNFIDPPLKPSIDPRHVLSQNFAPVHELPPTECEVIEGSLPPSLDGAYIRNGPNPQFLPRGPYHLFDGDGMLHALRISHGKKPTLCSRYVKTYKYTMENDAGFPLIPNVFSGFNSLVASAARGSLSAARFLTGQFNPANGIGLANTSLAFFGNRLFALGESDLPYVVNVTPDGDIETLGRHDFDGKLTFSMTAHPKIDPDTAECFAFRYGPVPPFLTYFRFDGNGKKHEDVPIFSMLTPSFLHDFAITKKYAIFCDIQLGLNPLDMISGGSPVGSVASKVPRIGILPRDAKDESMMKWFEVPGFNIIHAINAWEEDEGRTVVLVAPNILSMEHALERMELVHAMVEKVRIELDTGIITRQPVSARNLDFAVINPAFVGKKNRFVYAAVGDPMPKISGVVKLDVSKGEERRDCTVGCRMYGEGCYGGEPFFVAREEGGEEDDGYLVSYVHDERKGESRFLVMDAKSPELDVVAAVRLPRRVPYGFHGLFVKESELRKVSLS* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1320 590 MobiDBLite consensus disorder prediction 29 71 - -
Gso1g1320 590 Pfam Retinal pigment epithelial membrane protein 113 580 IPR004294 GO:0016702
Gso1g1320 590 PANTHER BETA-CAROTENE DIOXYGENASE 46 586 IPR004294 GO:0016702
Gso1g1320 590 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 46 586 - -
Gso1g1320 590 MobiDBLite consensus disorder prediction 1 20 - -
Gso1g1320 590 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1320 Gso-Chr1 49763094 49765867 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1320 K09840 - gmx:100777875 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1320 1 49763094 49765867 Gso1g1320 1 49763094 49765867 ECH