Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1313 ATGACTCTTTCGGACGACGAGGACGAGAATCTGGCTCAATTTCTGGAATCAGAAGTCCTCTCGGAGGTATCTGACAAGGAAGAGGAAAATGTGGAGGAACCGAAAGCAAAGAGAGCGCGCTTAGAAGAGGATGAGATTACTAAGCAAAAACAAAGTTCTGATTCATTATCTGCGCCGAAGAACATTGTTGTCAACAACGGGGTGGTGCCCAGAAGGATTGAGACTGGTTATTTCAGTCAAATTCCACCGGAGCTTTTCCATCACATCCTTAAATTTCTGTCCTCCGAGGACCTTGTTTCTTGTTCCTTAGTTTGTAGGTTCTTGAATTATGCTGCTTCAGATGAGGCATTATGGCGTCGCTTGTACTGTATGCGATGGGGCATGCTTCCCCCTACAAGGAAGTTAAGGGAATGCCCGTGGAAAATGTTATACATTCAGCGTGATGGAGAGGACATGGTTGAACTTGTTAGAAGCTGCCAAAATGAGTTTAAGGAGTACTACATTCAAATGCAAGCAGCTAAGCGAAGTCAAGCACCTCATCCTTCACAGTTGAAGGACGATAGGATAATTCTTGACAAAACATTAGCTGATCAAGTGTCATCATGGAAAAGCAGCAGGGGCCTCAGTGATACAGTGGTGACTGATCATGCTTGTTCTGGGGAAACGTGCTCTTACTACCATATTGGAGATGTATTTATTTGTGAGAAGACTGGACAAGTTCATGTTTGTGACGATACATGTAGAGAAGTAGTTATGGATCCCACAAACGAGCTTTTGGTCTGTACAATATCGGGGCACTGTTTTGATAGATTATTGTCACCTTCGGAAATGGAGCCTGATACTGAGCAGCAGCAAGGTGGTGTGACTGATGAGGCCGAGCCATTTATGGGATCTGGCCGTTTTGCACGAGCTTATTCACTGGGATACAATTGTGCTGATGAAAAGGAGCTTGAAGCTACATTGAGGTTTTGCTGA 975 0.4441 MTLSDDEDENLAQFLESEVLSEVSDKEEENVEEPKAKRARLEEDEITKQKQSSDSLSAPKNIVVNNGVVPRRIETGYFSQIPPELFHHILKFLSSEDLVSCSLVCRFLNYAASDEALWRRLYCMRWGMLPPTRKLRECPWKMLYIQRDGEDMVELVRSCQNEFKEYYIQMQAAKRSQAPHPSQLKDDRIILDKTLADQVSSWKSSRGLSDTVVTDHACSGETCSYYHIGDVFICEKTGQVHVCDDTCREVVMDPTNELLVCTISGHCFDRLLSPSEMEPDTEQQQGGVTDEAEPFMGSGRFARAYSLGYNCADEKELEATLRFC* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1313 324 MobiDBLite consensus disorder prediction 15 54 - -
Gso1g1313 324 Pfam UL92 family 222 289 IPR004289 -
Gso1g1313 324 SMART fbox_2 81 121 IPR001810 GO:0005515
Gso1g1313 324 MobiDBLite consensus disorder prediction 28 50 - -
Gso1g1313 324 SUPERFAMILY F-box domain 70 147 IPR036047 GO:0005515
Gso1g1313 324 Pfam F-box-like 79 123 IPR001810 GO:0005515
Gso1g1313 324 Gene3D - 64 152 - -
Gso1g1313 324 PANTHER F-BOX ONLY PROTEIN 3 68 267 - -
Gso1g1313 324 PANTHER F-BOX ONLY PROTEIN 3 268 324 - -
Gso1g1313 324 ProSiteProfiles F-box domain profile. 75 121 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1313 Gso-Chr1 49658646 49661763 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1313 - - gmx:100778591 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1313 1 49658646 49661763 Gso1g1313 1 49658646 49661763 ECH
Gso1g1313 1 49658646 49661763 Gso11g0766 11 6898603 6901932 GST