Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1273 ATGAAGCATAAAGATGGAAAACCGATTAATCAGCCAAATAAGAACCGGGCTGTGACTTTGGCAGTCACTTTAATTGCTCTATGTGGTTTTTCTTTCTATCTGGGAGGAATCTTTTGCTCTGGAAAGGATGGGGTTGTGGTTAATACCATTCAGAAGACCCTTGATTCTCCTAAGCAATCCTCAGGTTCTCTGCAAATTAAGCCAATCAGTTTCCCTGAATGCAGCATAGACTATCAAGACTACACTCCATGCACAGATCCAAAGAGATGGAGAAAGTATGGTGTGTACCGGCTTACTTTGTTAGAACGCCATTGCCCTCCAGTTTTCGACAGGAAAGAATGCTTGGTTCCTCCCCCAGAGGGTTACAAGCCTCCAATCAGATGGCCAAAGAGTAGAGATGAATGTTGGTACAGGAATGTGCCATATGACTGGATCAATAAGCAGAAGTCTAACCAGCATTGGTTGAGAAAGGAAGGGGAGAAATTCCTGTTTCCAGGTGGGGGTACTATGTTCCCCAACGGTGTTGGTGAATATGTTGATTTGATGCAAGATCTGATCCCAGGAATGAAAGATGGGACTGTGAGAACTGCCATTGATACTGGTTGTGGGGTTGCTAGCTGGGGTGGTGACTTGTTGGATCGCGGGATTCTAACAGTTTCTCTTGCCCCAAGAGATAACCATGAAGCTCAAGTTCAATTTGCTCTAGAGCGTGGTATCCCAGCTGTTCTTGGTGTCATTTCTACACAGAGACTTCCTTTCCCATCAAACTCCTTTGATATGGCTCATTGCTCCAGATGCCTTATCCCATGGACAGAATTCGGTGGTATTTATCTCATGGAAATACACCGTATCCTTCGTCCCGGAGGATTTTGGGTTTTGTCTGGTCCACCTGTTAACTACGAGCACAGGTGGCGTGGATGGAACACAACCATTGAAGACCAGAGATCAGATTATGAGAAGTTGCAAGAATTACTTACTTCAATGTGCTTTAAATTGTACAATAAAAAGGATGACATTGCAGTATGGCAGAAGGCTAAAGATAACAGTTGCTATGAAAAGCTGGCCAGAGAGTCCTATCCACCACAGTGTGATGACAGCATTGAACCAGATTCAGGATGGTACACTCCACTTCGTGCTTGTTTTGTGGTTCCAGATCCAAAATACAAGAAATCAGGCCTCACATACATGCCTAAGTGGCCTGAACGGTTGCATGCTACCCCTGAAAGGGTCACAACTGTTCATGGTTCTAGTACTAGTACTTTCAGTCATGACAATGGCAAGTGGAAAAAGCGCATTCAGCACTACAAGAAGTTGCTGCCTGAACTTGGCACTGACAAAGTTAGAAATGTCATGGACATGACTACAGTATATGGAGCTTTTGCTGCAGCCTTGATCAATGATCCCTTGTGGGTCATGAATGTGGTCTCATCTTATGGTCCCAACACACTCCCTGTGGTTTATGATCGTGGCCTTATTGGAACCTTCCATGATTGGTGTGAAGCTTTTTCAACATATCCTCGAACCTATGACCTCCTTCATCTTGATGGACTCTTCACTGCTGAAAGCCACAGATGTGAAATGAAGTATGTGTTGCTGGAAATGGATCGAATTTTAAGGCCTGGTGGGCATGCTATCATTCGAGAGTCCACTTATTTTGTGGATGCCATTGCTACTATTGCCAAGGGTATGAGATGGGTGTGTCGCAAAGAAAACACCGAGTATGGAGTTGACAAAGAGAAGATTCTGATATGCCAAAAAAAGCTATGGCACTCATCCAACAACGGTTCAAGATGA 1794 0.4426 MKHKDGKPINQPNKNRAVTLAVTLIALCGFSFYLGGIFCSGKDGVVVNTIQKTLDSPKQSSGSLQIKPISFPECSIDYQDYTPCTDPKRWRKYGVYRLTLLERHCPPVFDRKECLVPPPEGYKPPIRWPKSRDECWYRNVPYDWINKQKSNQHWLRKEGEKFLFPGGGTMFPNGVGEYVDLMQDLIPGMKDGTVRTAIDTGCGVASWGGDLLDRGILTVSLAPRDNHEAQVQFALERGIPAVLGVISTQRLPFPSNSFDMAHCSRCLIPWTEFGGIYLMEIHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEDQRSDYEKLQELLTSMCFKLYNKKDDIAVWQKAKDNSCYEKLARESYPPQCDDSIEPDSGWYTPLRACFVVPDPKYKKSGLTYMPKWPERLHATPERVTTVHGSSTSTFSHDNGKWKKRIQHYKKLLPELGTDKVRNVMDMTTVYGAFAAALINDPLWVMNVVSSYGPNTLPVVYDRGLIGTFHDWCEAFSTYPRTYDLLHLDGLFTAESHRCEMKYVLLEMDRILRPGGHAIIRESTYFVDAIATIAKGMRWVCRKENTEYGVDKEKILICQKKLWHSSNNGSR* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1273 597 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 326 IPR029063 -
Gso1g1273 597 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 80 586 IPR004159 GO:0008168
Gso1g1273 597 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 423 578 IPR029063 -
Gso1g1273 597 Gene3D Vaccinia Virus protein VP39 170 352 IPR029063 -
Gso1g1273 597 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 595 IPR004159 GO:0008168
Gso1g1273 597 PANTHER PMT16, PUTATIVE-RELATED 1 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1273 Gso-Chr1 49141615 49146737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1273 - - gmx:100810681 1275.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1273 1 49141615 49146737 Gso1g1273 1 49141615 49146737 ECH
Gso1g1273 1 49141615 49146737 Gso9g1759 9 42057220 42062488 GST