Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1242 ATGGCACCTTTGAACAAAGTTCTTTTGCTCCTCACCTTATTGTTCCTTGCGGTGGATGCCAAATACAAAAACAAGAAAGACAAGAAGAACAGTGTTTTTCATAAGATTCCCAAATTTCCAAAATTTCCAGTTCCTATCATTGGAGGTGACCAGAAAGTTGTTGTGGATGGTGGTAATAATGCCATTGCCAAGCCCGATTTTGAAACAAACAACCTAGGGCATTGGGAGTTGATTAATAAGCAGTCGGGTGTATCCGCCATGCAAATCAATTTGATGCCCAATAACAAGATGCTTGTATATGATGCCACCGTTTACCGTACCTCTAGACTCCCATATCCAAAAGGGATGCCATGTGTTCAATGGGTTGATGACAACCTTAAGCAAAGCAAAGAAGATTGTTTTGCTCATTCAATGGAATACGATATTGAGACTAATCAAGTTCGAGCACTCACGGTAAAGACAGATCCATGGTGCTCATGTGGAGGACTTACACCTGATGGTACCCTAGTTGTTGCTGGTGGTTTTGCAGACGGAGGGAAAACCTCCAGATACTATGGCGGTCAACCTGATTGCCAAGACTGTGACTGGAGGGAATACCCCAATAAATTGCAAGAGCCTAGATGGTATGCTACTCAAGCAATTCTTGCCAATGGAGAGTATATTGTGATAGGAGGTCGTAGATCTTTCAGCTATGAGTTCTTTCCAAAGGAAGGGCAACCTAGTGACAAACCCATATTTTTCCCATTCCTCTATGAAACCTCAGACATTGATGAAAACAATCTTTACCCTTTTGTCCACCTTTCTAGTGATGGCAATCTCTTCATCTTTGCCAACAACCGTTCCCTCCTCCTCAACCCTACCACCAACAAAGTGGTCCGCACCTACCCCGTCCTCCCCGGTGGTTCCCGGAACTACCCGGCTTCCGGCATGTCTTCCATCCTCCCTATAAAACTCGATGGCACTGAGCTAAGTAGTGCCTCCATCAAGGTAGAGGTCCTTGTATGTGGTGGCAACAGCCATGATAGTTTCATCTTAGCCGAGACTGAAAAAATTTTCAAACCAGCCATCAAAGATTGTAGTAGAATGGTGATCACAGACCCTGACCCTAAATGGGACAGTGAAGAGATGCCTTCAGGGAGAACCATGGGGGATTCTCTTGTCCTCCCCAATGGACAAATCTTGTTCATCAATGGTGCACAAAAGGGTACAGCTGCATGGTGGGATGCTGATGAACCTAACTTCACACCAGTATTGTATTTCTCTGAAAAACCTAAGGGTCAAAGGTTTAAGGTGTTGAAACCTAGCCAAATAGCTAGAATGTACCACTCAACCTCAGCAGTGCTTCCTAGTGGCAAAATTTGGGTTGGTGGTAGCAACACCCATGATACTTACAAGGACAAGGATAGGTTTCCAACTGAGACTAGGATTGAGGCTTTCTCTCCTCCTTACTTGGACCCAAAACTAGATAAATACCGACCCCAAATTGTTGAGGAATCTTCAGAGAAGAAGCTGATGTATGGAAAAAACTTTGAGACACAATTCAAATTGCAAGACACGAACCAGAAATTGACCAAGCAAGACATTAAGGTCTCCATGTATTTTCCACCTTTCACCACTCATGGCTACTCTATGAACCAAAGGTTGTTGTTTCTTAAGACTTTCATTGCTCAAAACTCTGAAGGGACTTACAAGGTTACGTCCAAGGCACCAACTTTCCGAGAGGTGGCTCCCCCAGGATATTACTTGCTCTTCATTGTCCATCGTGGAGTTCCTAGCAAGGGAATGTGGGTGCAAATTGGGTAG 1803 0.442 MAPLNKVLLLLTLLFLAVDAKYKNKKDKKNSVFHKIPKFPKFPVPIIGGDQKVVVDGGNNAIAKPDFETNNLGHWELINKQSGVSAMQINLMPNNKMLVYDATVYRTSRLPYPKGMPCVQWVDDNLKQSKEDCFAHSMEYDIETNQVRALTVKTDPWCSCGGLTPDGTLVVAGGFADGGKTSRYYGGQPDCQDCDWREYPNKLQEPRWYATQAILANGEYIVIGGRRSFSYEFFPKEGQPSDKPIFFPFLYETSDIDENNLYPFVHLSSDGNLFIFANNRSLLLNPTTNKVVRTYPVLPGGSRNYPASGMSSILPIKLDGTELSSASIKVEVLVCGGNSHDSFILAETEKIFKPAIKDCSRMVITDPDPKWDSEEMPSGRTMGDSLVLPNGQILFINGAQKGTAAWWDADEPNFTPVLYFSEKPKGQRFKVLKPSQIARMYHSTSAVLPSGKIWVGGSNTHDTYKDKDRFPTETRIEAFSPPYLDPKLDKYRPQIVEESSEKKLMYGKNFETQFKLQDTNQKLTKQDIKVSMYFPPFTTHGYSMNQRLLFLKTFIAQNSEGTYKVTSKAPTFREVAPPGYYLLFIVHRGVPSKGMWVQIG* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1242 600 Gene3D - 69 488 IPR037293 -
Gso1g1242 600 Gene3D Immunoglobulins 491 600 IPR013783 -
Gso1g1242 600 PANTHER GLYOXAL OXIDASE AMINO-TERMINAL PROTEIN 1 600 - -
Gso1g1242 600 SUPERFAMILY Galactose oxidase, central domain 139 485 IPR011043 -
Gso1g1242 600 SUPERFAMILY E set domains 489 600 IPR014756 -
Gso1g1242 600 Pfam Galactose oxidase-like, Early set domain 492 599 IPR015202 -
Gso1g1242 600 Pfam Glyoxal oxidase N-terminus 87 337 IPR009880 -
Gso1g1242 600 CDD E_set_GO_C 492 599 IPR015202 -
Gso1g1242 600 PANTHER SECRETED PROTEIN-RELATED 1 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1242 Gso-Chr1 48615549 48619351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1242 - - gmx:100797716 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1242 1 48615549 48619351 Gso1g1242 1 48615549 48619351 ECH