Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1197 ATGAAACTCGTTTGGTCTCCCGAATCAGCCTTACAAGCTTACATAGACACGGTTAAATCATGTGAGAAATTCAAGGAAACCGGGGTACCAGAGTTGCTATCAGCCATGGCTGCAGGGTGGAACACGAAATTCATAGTGGAATCATGGTCCTACGGTGGTCCCATAGCTGCAAGCGTAGGCCTAGCAGTTGCAGCTCGCAACACGGGTGCAAGACACGTGTGCATAGTCCCGGACGAGCGATCAAGGGCACAGTACATAAAGGCTTTGGCTGAGATGGGGGTGTCGCCGCCTCCGGAGGTGGTGGTGGGGGAGGCGGAGGTGGCGGTGTCGCAGCTCGCGGGGCTCGACTTTCTGGTTGTGGACTGCAAGAGGAAGGAGTTCGCTAGGGTTCTAAGGGTGGCCAAAGTGGGTCCAAAAGGAGCAGTCTTGGCATGCAAGAATGCATGGCAGAGAAACTTTTGTGGCGGCTTCAGATGGAGCGTGGTGCTACAAAAGGGTGTCCGTGTGGTTAGGTCAGTTTTCCTCCCAGTTGGAAAGGGTTTGGATATTGCATACATAGGAAGTAGTAGAAGTGGTGCAGCAGCAACAGCTTCAAAGGGCCCTCGCCGTTGGATCAAGCACATAGATCAACAATCAGGAGAAGAACACCTTTTCAGAAAGCCATCTCATTAG 672 0.5268 MKLVWSPESALQAYIDTVKSCEKFKETGVPELLSAMAAGWNTKFIVESWSYGGPIAASVGLAVAARNTGARHVCIVPDERSRAQYIKALAEMGVSPPPEVVVGEAEVAVSQLAGLDFLVVDCKRKEFARVLRVAKVGPKGAVLACKNAWQRNFCGGFRWSVVLQKGVRVVRSVFLPVGKGLDIAYIGSSRSGAAATASKGPRRWIKHIDQQSGEEHLFRKPSH* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1197 223 Pfam Protein of unknown function (DUF1442) 1 220 IPR009902 -
Gso1g1197 223 Gene3D Vaccinia Virus protein VP39 7 186 IPR029063 -
Gso1g1197 223 PANTHER ANKYRIN REPEAT/KH DOMAIN PROTEIN (DUF1442) 1 220 - -
Gso1g1197 223 PANTHER DUF1442 FAMILY PROTEIN 1 220 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1197 Gso-Chr1 47648342 47650210 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1197 - - gmx:100791746 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1197 1 47648342 47650210 Gso1g1197 1 47648342 47650210 ECH
Gso1g1197 1 47648342 47650210 Gso3g0209 3 2914868 2916638 GST