Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1187 ATGTCGATTATATCACGCAGAGGCATCTGTTACATGCCAAGACTAGATGCAGCAAAAGTATCTGCTGCTTTGCTAGAGAAAGGCCAAAATCGTGTCATAGATGCTTCACTTACACTTATTCGAGAAAGAGCAAAGCTTAAGGGAGAACTTGTGCGTGCTTTGGGAGGTGCTAAAGCAACTTCAACTCTTCTTGGAGTTCCTTTGGGACATAATTCATCGTTCCTTCAAGGGCCTGCATTTGCACCTCCTCGCATTAGGGAGGCCATTTGGTGTGGTAGCACAAACTCAACAACTGAAGAAGGCAAGGAATTACAAGATGCACGAGTGCTAACTGATGTTGGTGATGTTCCTATCCAAGAAATTCGAGATTGTGGGGTAGATGATCATAGATTAATGAATGTAATTGGTGAATCTGTAAAGTTAGTGATGGAGGAGGATCCATTACGTCCATTAGTTTTAGGCGGTGATCACTCAATATCATTTCCAGTTATCAGAGCTGTCTCTGAGAAGCATGGAGGACCAGTTGATGTTCTTCATCTTGATGCGCATCCTGATAACTATGATGCCTTTGAAGGAAACATTTATTCACATGCTTCTTCTTTTGCTCGAGTCATGGAGGGTGACTATGTTCGACGTCTCTTGCAGGTCGGTATAAGATCAATAACAGCTGAAGGGCGTGCACAAGCCAAAAAATTTGGTGTTGAGCAATATGAAATGCGAACATTTTCAAGAGATCGCCACTTTTTAGAGAACCTGAAACTAGGGGAAGGTGTTAAAGGTGTATATATCTCAATAGATGTGGATTGTCTCGATCCCGCCTTTGCTCCAGGAGTGTCTCACATAGAGCCAGGAGGTCTTTCTTTTCGTGATGTTCTCAACATCCTGCACAATCTTCAAGGTGATGTTATTGCTGGAGATGTGGTCGAATTAAACCCACAACGTGACACCGTTGATGGAATGACTGCCATGGTAGCTGCTAAGCTGGTCCGAGAACTGGCTGCAAAGATTTCTAAATGA 1017 0.4326 MSIISRRGICYMPRLDAAKVSAALLEKGQNRVIDASLTLIRERAKLKGELVRALGGAKATSTLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELQDARVLTDVGDVPIQEIRDCGVDDHRLMNVIGESVKLVMEEDPLRPLVLGGDHSISFPVIRAVSEKHGGPVDVLHLDAHPDNYDAFEGNIYSHASSFARVMEGDYVRRLLQVGIRSITAEGRAQAKKFGVEQYEMRTFSRDRHFLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQGDVIAGDVVELNPQRDTVDGMTAMVAAKLVRELAAKISK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1187 338 PIRSF Arginase 51 338 IPR006035 GO:0046872
Gso1g1187 338 PANTHER ARGINASE/AGMATINASE 4 338 IPR006035 GO:0046872
Gso1g1187 338 Gene3D Ureohydrolase domain 47 338 - -
Gso1g1187 338 Pfam Arginase family 62 332 IPR006035 GO:0046872
Gso1g1187 338 SUPERFAMILY Arginase/deacetylase 58 334 IPR023696 -
Gso1g1187 338 CDD Agmatinase-like_2 63 333 - -
Gso1g1187 338 ProSitePatterns Arginase family signature. 264 285 IPR020855 GO:0016813|GO:0046872
Gso1g1187 338 ProSiteProfiles Arginase family profile. 52 338 IPR006035 GO:0046872
Gso1g1187 338 PANTHER ARGINASE 2, CHLOROPLASTIC/MITOCHONDRIAL 4 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1187 Gso-Chr1 47351126 47366993 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1187 K01476 - gmx:100789799 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1187 1 47351126 47366993 Gso3g0221 3 3068488 3075826 GST