Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1176 ATGGCGCTCTCAGCTTCACGGGCAATGTCAAAGGGTGTGGTGGTATCTGTGCCTGTTCTGGTTCTATCTGCTTTAGTGGCTACTGTTTTCCTGTTCTTCCTTTTGTCCTCTCTTTCATCCTGCTCCTGCCCTACTCCTTCAGAAATCTCTGCCTCCAATGTTAGGAGTGTTGGTGTTGGTATTGGTGTTCCTGAGTCTAGCAGCGGTAATGTTCCGTTAGCCACAAGGAAGGAGTCTAGCAGCAGTAATATTCCGTTATCAACGAGGAAGGAGGATGTTGAGTGGGTGAAGAATCAAATCCAAGCAAATGGGCTTCATATGCATGACAATGTGCTTCGCAAGGGTATTAACCCTCGCACTCGGGCTCAGCAACTTGAGGATCTTAGACAATTTAAGGGCATATCTCACTATGAGGGACCTGATTCAGATAATCACACAGCCTTGCCATGCCCTGGGGAACTACTAGTTGAAGAGCACCATAGCAACTATGGTGAACCTTGGGCCGGGGGAAGAGATGTGTTTGAGTTTCTTGCTGAAGCCAGTCAACTTAGATCAGACTCACAGGTGCTAGAGATAGGCTGTGGCACTCTTCGAGTTGGTTTGCATTTCATTCGATACTTAAATCCTGAACACTTTCATTGTCTTGAAAGGGATGAGCTCTCTTTGATGGCTGTATTTAGGTATGAGCTTCCTGCCCAAGGCCTCTTATACAAACGGCCTTCGATTGTTAAGGGGGATGACATGGATTTCAGCAGGTTTGATTCTGGCATAATGTATGATTTGATTTATGCTAGTGCTGTATTTCTTCACATGCCTGATAAACTCGTGTGGACTGGATTGGAAAGATTAGCATCTAAATTGAAACCTTATGATGGACGAATCTTTGTATCACATAATATAAAGTTCTGTTCAAGGTTGGGAGGAGAGGAATGCACAAAGAGGCTTGCAAGTTTGGGGCTTGAGTATCTTGGGAAGCATACTCATGATAGCTTACTATTCAATCACTATGAGATATGGTTTGAATTTAGACGGTCAAAGGCATAA 1044 0.4425 MALSASRAMSKGVVVSVPVLVLSALVATVFLFFLLSSLSSCSCPTPSEISASNVRSVGVGIGVPESSSGNVPLATRKESSSSNIPLSTRKEDVEWVKNQIQANGLHMHDNVLRKGINPRTRAQQLEDLRQFKGISHYEGPDSDNHTALPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEASQLRSDSQVLEIGCGTLRVGLHFIRYLNPEHFHCLERDELSLMAVFRYELPAQGLLYKRPSIVKGDDMDFSRFDSGIMYDLIYASAVFLHMPDKLVWTGLERLASKLKPYDGRIFVSHNIKFCSRLGGEECTKRLASLGLEYLGKHTHDSLLFNHYEIWFEFRRSKA* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1176 347 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 1 346 - -
Gso1g1176 347 CDD AdoMet_MTases 189 297 - -
Gso1g1176 347 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 165 307 IPR029063 -
Gso1g1176 347 Gene3D Vaccinia Virus protein VP39 170 332 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1176 Gso-Chr1 47198185 47201249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1176 - - gmx:100787144 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1176 1 47198185 47201249 Gso3g0225 3 3101223 3104074 GST