Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1161 ATGAGGGATCCGAATCTGGAGTTGCAGGAATCGGGTTGGGAGGAGCTGCGCAAGGAAGCGCGCAAGATCGAGGGCGATCTCGACGTCAAGCTCTCCTCCTACGCTAAACTCGGCGCTCGCTTCACCCAAGGAGGTTCAGGTTATGTGGACAGTGGTTCACCACCTATTGGGTCCAGTAGGTCTTGGAAGTCCATGGAAATGGAAATCCAGTCTTTGCTCGAGAAACTGTTGGACATAAATGATTCAATGAGTAGATGTGCTGCATCTGCTGGACCGGCTACTTCTGTAACTCAAAAGTTGGCTAGGCACAGAGACATTCTTCATGAGTTTACCCAGGAATTTAGACGTATCAAGGGGAACATAAACTCAATGAGGGAACATGCAGAGCTTTTGAGTTCTGTCAGGGATGATATTACTGACTTTAAGACATCAGGCAGTATGTCACCAAGGATGCAGTTACTACGTGAGAGAGCTGCCATCCATGGAAGTATATCTCATATAGATGATGTGATTAGTCAAGCTCAAGCAACAAGAGCTGTGTTGGGTTCTCAGAGAACATTGTTTACTGATGTTCAAGGAAAAGTGAAGGTTCTTGGTGACAAGTTCCCCATGATTCGTAGCCTGCTTGGTTCAATAAGAAGGCGGCGCTCAAGGGATACTCTTATTCTGTCAGCAGTAATTGCTGCTTGTACGTTGTTTCTCATCATTTATTGGCTCTCAAAGTAA 726 0.4601 MRDPNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGSGYVDSGSPPIGSSRSWKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLSSVRDDITDFKTSGSMSPRMQLLRERAAIHGSISHIDDVISQAQATRAVLGSQRTLFTDVQGKVKVLGDKFPMIRSLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1161 241 Pfam Snare region anchored in the vesicle membrane C-terminus 152 216 - -
Gso1g1161 241 PANTHER GOS-28 SNARE- RELATED 4 241 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Gso1g1161 241 PIRSF Golgi_SNARE 7 240 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Gso1g1161 241 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-2 4 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1161 Gso-Chr1 46831918 46853951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1161 K08495 - gmx:100781813 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1161 1 46831918 46853951 Gso3g0237 3 3277288 3284316 GST