Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1135 ATGGCTTTAGGTGGAACAGCTCCCCCGAGAGGAAGTGCAGCAGCTACTGCCAGCATGAGGAGAAGGAGAACAACCGGTGGTGCGGCCTCTGGAGGAGCAGCTGGAACTATGCTCCAATTTTACACTGATGATGCCCCTGGACTCAAGATCTCCCCAAATGTGGTTCTTGTAATGAGCATTGGCTTTATAGCATTTGTTGCCATCCTTCATGTGATGGGCAAGCTGTACTTTGTGCGTAGGGAGGCTTAG 249 0.5141 MALGGTAPPRGSAAATASMRRRRTTGGAASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1135 82 PIRSF Sec61_beta 2 80 IPR030671 GO:0005784|GO:0006886
Gso1g1135 82 Pfam Sec61beta family 34 73 IPR016482 -
Gso1g1135 82 MobiDBLite consensus disorder prediction 1 33 - -
Gso1g1135 82 PANTHER SEC61 SUBUNIT BETA 1 81 IPR030671 GO:0005784|GO:0006886
Gso1g1135 82 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1135 Gso-Chr1 45870828 45872426 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1135 K09481 - gmx:100500335 124.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1135 1 45870828 45872426 Gso3g0279 3 3959871 3961538 GST