Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1129 ATGGAAATCAATTCTCTATCACTCCCCTCTTGCCGTATGCCTATTCTGCTAAAGGACTCTCACAGCGGTTCCCCTCAGCAACAAAACAAGTTAATCTGGTGGCAGAATGAAAAAGGAGTAATTGGTGGTAAGGACAACAGTGTAGATTGCTCTTCATTGGCTCAAAACTCTAGTAGGAAAAGAATGATTCATCAATCTGATGGGAGTCTTCATGATATAAAAGTTGAAGGTTATATGCCAAAACAGACCTCATTGTGTGTTTCGATGCTATATTACACGGAGAATGGCTTCTTTCCTCAAGCACAGACTTTATGGGAGCAGCTCGTAAATAGCTCTTTTGTTCCTTCTGTTCAGTTCATTTCAAGATTATTTGATGCTTATGCAAAGCATAGGAAATTCGATGTGGTGATCGATATTCTACGTTATGTGGATATGAGGAATTTCAGTATTTTACCAGATGTCTACTGGTTGGCTATATCTTGTTTTGGAAGAGAAGGACAGCTTGAATTGATGGAGGATATGGCTAATGAAATGGCTTCAAGTGGTGTCCATATCTATTCTAGAACTGCCAATGCTTTCCTTTTGTATTATAGTCTTTTTGGTACTTTGGAAGAGATGGAGAACACGTATGGCCGCCTTAAGAAATCTAGATTTCTAATAGAGAAGGAAGTGATTCGGGCCGTGGCCTCTGCGTATATAAAGGAGAGAAAATTCTATGAATTGGGTGAGTTCCTAAGAGATGTGGGTCTACGTAGAAAAAATGTGGGAAACCTTTTATGGAACCTTATGTTACTTTCTTATGCTGCCAATTTCAAGATGAAAAGCTTGCAACGAGAATTTATTGGAATGGTTGAATCCGGGTTCCGTCCTGATATTACGACCTTTAATATCCGTGCTCTGGCCTTCTCAAGGATGGCTTTGTTCTGGGACCTCCACCTTAGCATTGAACATATGGAACATACGAAGATCATTCCTGATCTAGTGACTTTTGGGTGTGTAGTTGATGCATACTTGGATAGAAGGCTTGGAAGAAACCTGGACTTTGCTCTAAACAAAATGAATTTGGATGATTCTCCGCGATTATTAACAGATCCTTTTGTGTATGAGGCCTTAGGTAAAGGGGGCTTTCAAATGAGTTCCGAAGCATTTTTTGAGTACAAGACGCAAAGGAAATGGACTTACCGTTCTTTGATACAAAAGTATCTCAAGAAACATTATCGAAAGAACCAGATATTTTGGAACTACTAA 1248 0.3942 MEINSLSLPSCRMPILLKDSHSGSPQQQNKLIWWQNEKGVIGGKDNSVDCSSLAQNSSRKRMIHQSDGSLHDIKVEGYMPKQTSLCVSMLYYTENGFFPQAQTLWEQLVNSSFVPSVQFISRLFDAYAKHRKFDVVIDILRYVDMRNFSILPDVYWLAISCFGREGQLELMEDMANEMASSGVHIYSRTANAFLLYYSLFGTLEEMENTYGRLKKSRFLIEKEVIRAVASAYIKERKFYELGEFLRDVGLRRKNVGNLLWNLMLLSYAANFKMKSLQREFIGMVESGFRPDITTFNIRALAFSRMALFWDLHLSIEHMEHTKIIPDLVTFGCVVDAYLDRRLGRNLDFALNKMNLDDSPRLLTDPFVYEALGKGGFQMSSEAFFEYKTQRKWTYRSLIQKYLKKHYRKNQIFWNY* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1129 415 PANTHER OS08G0520200 PROTEIN 7 415 - -
Gso1g1129 415 Gene3D Tetratricopeptide repeat domain 249 347 IPR011990 GO:0005515
Gso1g1129 415 Gene3D Tetratricopeptide repeat domain 52 248 IPR011990 GO:0005515
Gso1g1129 415 PANTHER OS08G0520200 PROTEIN 7 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1129 Gso-Chr1 45738703 45741424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1129 - - gmx:100818684 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1129 1 45738703 45741424 Gso3g0304 3 4546878 4550768 GST