Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1110 ATGTGGAGGTGCATCAATGGAAGAATTGCCAGAAGATTTTTATCCACTTCTTCTGCCAGTGCCCGTGGTTGGTGGGACCATGTAAGGCCAGCACCGAAGGACCCCATTGTTCGTGTGAACGAGGCATTTCTAGCTGACCCTTTTCCCCATAAGATCAATCTTGGAATAGGTACTTATAAGGGTGATGATGGCAAAGCTTTCATTCCTCAAAGCGTTCGTGAGGCAGAAACAAAGATTCAGAGATGTAAATTGGAGGAGTCAAACGCTTCCGCAGTCAGATCAAAATTTGTTCAGGAGTGTGTGAGATTAGCATATGGGAATGATTCAAATGTTGTAAGAGAAGGATTGTTTGCAGGAGTTCCAACTCTGTCTGGAACCGGTGCATGTCGGCTTTTTGCTGAATTTCAACGGCATTTCTATCCCGATTCTCAAATGTATCTACCAGATCCTACTTGGTCAAATCACCACAATATATGGAGACAGGCTGAAATTCCAGTCAAAACCTTCCACTACTACCATCCAGATACAAAGGGTTTAGATTTTGCTGCACTCCTCAATGATGTCAAGAATGCACCAGATTGTTCTTTCTTCTTGCTTCATCCGTGTGCCCACAACCCAACTGGTGTTGACCCCACTGAGGAGCAATGGAGAGAAATATCATACCAGTTCCAGGTAAAAAATCATTTCCCATTCTTTGACATGGCTTATCAAGGATTTTCAAGTGGGGATCTTGACAAGGATGCAATAGCACTTCGAATTTTCCTTGAAGATGGGCATTTGATTGGTTGTGCTCAATCTTTTGCAAAGAACATGGGATTATCAGAACATAAAGCTGGTTGTCTTAGTGTTTTGTGCCAGAGTATAAAGCAAGTAGCTGCACTAAAAAGCCAACTGCAGCTGATGTCCCATGCAATGTATAGCAGCATTCCTTTTCAGGGTATTTCACTAGTTACTATGATATTAAGCGAGCCAGATACAGAAGCACTTTGGAGAAAAGAGATAAAGGTCATGGCTAAACGGATTCAAACTATGCGAACTACCTTGCGGCATTGTCTTGAGAACTTGCATTCATCTTTCAATTGGGAGCACATAACTGATCAGGTTGGCATGTTCTGTTTTTCTGGATTAACCCCTGATCAGGTTCAACAGATGGAGAAGCTGTTCCATATATACATGACCCCTGATGGAAGAATGAGCATGTCAGGTGTGACCTCTAGCAATGTGGATTACTTGGCAAATGCAATACATCAGGTGACCAGAATCGATGAGGAAGCCCTAAGATCATGTTACGTATAG 1296 0.4267 MWRCINGRIARRFLSTSSASARGWWDHVRPAPKDPIVRVNEAFLADPFPHKINLGIGTYKGDDGKAFIPQSVREAETKIQRCKLEESNASAVRSKFVQECVRLAYGNDSNVVREGLFAGVPTLSGTGACRLFAEFQRHFYPDSQMYLPDPTWSNHHNIWRQAEIPVKTFHYYHPDTKGLDFAALLNDVKNAPDCSFFLLHPCAHNPTGVDPTEEQWREISYQFQVKNHFPFFDMAYQGFSSGDLDKDAIALRIFLEDGHLIGCAQSFAKNMGLSEHKAGCLSVLCQSIKQVAALKSQLQLMSHAMYSSIPFQGISLVTMILSEPDTEALWRKEIKVMAKRIQTMRTTLRHCLENLHSSFNWEHITDQVGMFCFSGLTPDQVQQMEKLFHIYMTPDGRMSMSGVTSSNVDYLANAIHQVTRIDEEALRSCYV* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1110 431 SUPERFAMILY PLP-dependent transferases 24 420 IPR015424 -
Gso1g1110 431 Gene3D - 83 323 IPR015421 GO:0003824
Gso1g1110 431 PANTHER ASPARTATE AMINOTRANSFERASE 12 423 IPR000796 GO:0006520|GO:0008483
Gso1g1110 431 PRINTS Aspartate aminotransferase signature 197 216 IPR000796 GO:0006520|GO:0008483
Gso1g1110 431 PRINTS Aspartate aminotransferase signature 228 240 IPR000796 GO:0006520|GO:0008483
Gso1g1110 431 PRINTS Aspartate aminotransferase signature 296 321 IPR000796 GO:0006520|GO:0008483
Gso1g1110 431 PRINTS Aspartate aminotransferase signature 364 382 IPR000796 GO:0006520|GO:0008483
Gso1g1110 431 PANTHER ASPARTATE AMINOTRANSFERASE 12 423 - -
Gso1g1110 431 CDD AAT_like 120 417 - -
Gso1g1110 431 Gene3D Aspartate Aminotransferase, domain 1 28 415 IPR015422 GO:0003824
Gso1g1110 431 Pfam Aminotransferase class I and II 50 415 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1110 Gso-Chr1 45197087 45200851 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1110 K14455 - gmx:100814593 895.575