Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1096 ATGCAAAACCAACAACCCTCCGGTATCATCAACCCTAAGTATTGTGCTCCATATAATGTCGACCTAGCAATTGTGAGAAAGGTCTTGGCATTAACTGATAGCTTTACCGTCACCGATGTCAATGGCCAAATTGTTTTCAGCCTTAAGGCCTCTCTCATGACCCTCCATGACCACCGTGTCTTGCTTGACGCCGCCGGAGAACCCGTCGTCACACTACGCCGGAAGTTAATGTCTGCTCATGATCGGTGGCAAATTTTCCGTGGTGAAAGCACGGAGCCGAAAGATTTGATCTTTAGTGTGAAGCGATCGTCCTTTTTCCAGCTGAAGACGAAATTAGATGTGTTCTTAGCCAATAATACTAAAGAAGAAGTATGTGACTTTAAGGTGAAAGGAAGTTGGTTCGAACGATCTTGTGTTGTTTATGCTGGTGAATCTCTGAACATTGTTGCCCAGATGCATAAGAAGCACACTGTTCAAAGCATTGTGTTTGGAAAAGATAATTTCATGGTTACAGTGTATCCAAATATTGACTATGCATTCATAGTGGCACTGATTCTGATTCTTGACGAAATTCACAAAGACATGAAAAATCAATGA 597 0.4221 MQNQQPSGIINPKYCAPYNVDLAIVRKVLALTDSFTVTDVNGQIVFSLKASLMTLHDHRVLLDAAGEPVVTLRRKLMSAHDRWQIFRGESTEPKDLIFSVKRSSFFQLKTKLDVFLANNTKEEVCDFKVKGSWFERSCVVYAGESLNIVAQMHKKHTVQSIVFGKDNFMVTVYPNIDYAFIVALILILDEIHKDMKNQ* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1096 198 PANTHER TUBBY C 2 PROTEIN 4 196 - -
Gso1g1096 198 PANTHER - 4 196 IPR007612 -
Gso1g1096 198 Gene3D - 7 197 IPR038595 -
Gso1g1096 198 SUPERFAMILY Tubby C-terminal domain-like 9 192 IPR025659 -
Gso1g1096 198 Pfam LURP-one-related 11 187 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1096 Gso-Chr1 44764461 44766687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1096 - - gmx:100811220 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g2304 9 47299193 47301148 Gso1g1096 1 44764461 44766687 PCT
Gso1g1096 1 44764461 44766687 Gso9g2304 9 47299193 47301148 PCT