Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1093 ATGCCGCTGTCGAAGTACCGCGTGCGGAACGAGTACAGCTTGGCGGATCCCGAGCTGTACCGCGCCGCCGACAAGGACGATCCCGAGGCGCTTCTCGAAGCCGTCGCCATGGCCGGCCTCGTCGGACTCCTGCGCCAGCTCGGCGACCTCGCCGAGTTTGCTGCTGAGATCTTTCATGATTTACATGAAGAAGTAATGGCTACTGCTGCAAGAGGCCATGGTCTTATGGCTCGTGTTAAACAGCTTGAGGCTGAAGTTCCCTCACTAGAGAAGGCGTTCTTTTCTCAAACTCATCATTCTTCATTCTATACTAATGGAGGGATTGATTGGCATCCAAATCTACGGTTTGAACAAAATCTTGTGACTCGTGGAGACTTACCTCGATTTATAATGGATTCATATGAAGAATGTCGTGGTCCTCCTAGACTGTTCCTGCTGGATAAGTTTGATGTAGCTGGGGCTGGGGCATGTCTGAAGCGTTATACTGATCCGTCATTCTTTAAAATGGAATCAACTTCATCTGTAACTGCTACAATAGAAGTTCAGAGAGAAAAGAGAATTCGTAAAGTAAAGCTGAAGAAAGGAGCACGACTGAGGGATGGTGAAACCCCTAATGCTGTACCATCACATGCAAAATTACATCAGCTGCTTCTTGAGGAGCGTATTGAGAATGGTTATAGTAATCCTGCACGCCGAGTGAAGTTGAAGAAAAGACAATTGAATGGACCAGCTGTTGAAACAAGAGATGGGAAGAGTTACATGGAGAAATTTCTGGAAACTCCTTCACCTGATCATAAAATGGTTTGTGAAACTTCAATCTTTCCATTGCCTGTGAAACAGACACCGTATGATACTAGTGAGGCTGGGATTAAAATTCTTGAAATCAGCAGCATTAGTCCTGTGAAAAAGTCATTGGGAAATAAAAACACCTATTCATCCCCTGATGAGAATGAATTAGAACTAAAACCATTTTCAGAAATGGATGGTGGGACAAATGAAGATCTTGTGAAGGTGAAAGAACAAATCTCAGATGGTGTGACAGACAAGAAGTCTTCTAATCATCTTAAGTTGCCTGATGCAGCAGAATTGGCTATCAATGAACAAAAGAAAATAGAAGGCAGCTTAGATGGGCACCATTCTGATGATGTGACTAGTGAAGTTGACAATTACATGGATGCTTTAACTACAATGGAATCAGAACTGGAAACAGACAATGAGTATAAACCTAAGAATAGTTTCTTGAATATTCAAAAGGCAGCAAATACTAATGATAAAGAAGAACATCAATTACAAGCTCAATTTTCAGATTCTCAATCATTTGGGGACTCCTCAATGTCTGATGACAGTAGTTCTTTCAATCAAGATAGAAACGAAGAACATATTAAAGTGGAAGCTCAGTCTTCAGATTCTCAATCAACTGGAACCTCATCTACATTAGATGATAATAGTTCATTCAGAAGAGATGGAAATGGGCAGCATAGAGAACCGCAAGCTCACTTCTCAGATTCTCAATCTGTTGGTAGCTCCTCTACATCAGACGAAAATTTCAAGAAAGATAAATCCTATTTACCTCACTCTGATTCGTTAACCACCGCAGTTGAAAATATACAATCGGAACCTATATTATTCACAAATGCCAAGTGTTGTGAACTGAAGGTTGAAGATGCACCATCCAACCAGCTTCCCCAAAATGTTGAGTTTCAACACACAGATTGTGAGAGGTTTGTCATGCATGATGATGCACCGGTTCATGAAGAAGAGATTTCATCTGATTTGGGGCAAGCCTCTTCAGATTTGATGACTTCAGGGCAGGTGTTGTGTTCTAATCTTGGATCCACCTTGCCAGTGATCCTACCTGCTGCAACTCAATCAGATGAAACCCCATCTGCCCCTGCTGAACTTAATTTAAGATTAGATGATGACAATGCAGACAGAACAGGTCTTGTTGAATCTATTTCTTCCAAACCTGTTTCTCTCTCCCTAACAGATGATGCTCACCCAGTGGGTTCTTCTGCTAAAACATCATTAGACAACTTGGATGATGATGACCCATATATTCATTGTGATGATCTGTTACAAGTTCTTAATGATTTGGAATTAGCTCATGGAGATGAATGCAGTGATCATTCTGAAATCAAAATGTCCCAGGCAGAGCCTCCCAAAGAAAATCCTTCTAAAATTTTGGTTAATAGAGATATTGGTTCACCAGTAGAGGATCCTGTTTCCCCATCCATGGAAGAATTAAACTTGAATTCAGGTGCTACACTGGCTCATGATTGTCAAGACTCAAAAGATGAAGATTGTACTGTAACTACCCAACTTAATTCGGAGACTCCTGTTTCTCCATTGAGTTGCTTTACCGGGGGGCTATTATCTGATTCAACTCATAACAACACTCAAGATGAACCGGGCTCAGCAGAAATTGAAGTCTCATCTTCTGATCTCCAATCAAAAGTTGGAGAGATACCAAAGATGGTGCATGATGATGAAATAAATGGATCCACCTTCAGTGTCAATCCAGTTGAAGATGATGGTCATTTTAAACGTTCATCTCCTGATAATCATGTGATGGTAAATGATCTGGTCACTGAAAATGTTCAGTCAGATGATCAAGCTGTGTATTCTGCTCCTTCTGTTGATAGTGCTGAAAATGATGAGGGTGTTGTTAGTTGTCCAGCTTCAAGTCAGATTTGTTCTCCATCAAGGGGTCTTTCAGATTTGGAAGAGCCTCCGTTGAGTTCTCATTCTTATCCAATGGAAATAAAATCCAATGAAGTAGAATTGACGCAAATTGCCATGGTCACAAATGCTGAGAAGAGTGAAAATCAATCAGCACCATTGCTAGATGTAGCGTCATCTGATGTCGTAAATTCTTCATTGAGTAATATTACAAAGTTAGAAGAATCTCTTTCTACCTTTGCAGATTCACAGAAGAAAGAGATAGAAGTTGATGAGGCAGTTGCTAGAGATTCTTTGACAGAATTAGAGGAACAGAAGATAGTGGATCAGCCAGAAATTGCTTCTGTGGATGTACAATTGAACCTGAACAAACTGGTTCCCTTTGATCTTCCAGATTCAGAAATATGTAATAATATTCAAAAGTCATCTCCAAGGGAGAAATTCCAACATGGTGCTTTTGTTGATGATGCAGAAATGGTGCCTAAATTTTTGGGGTTAGATGCCCAGCAATCAGAATCATTATCTTATGGCCTGCATGATCCATTACAAAATGACAGAGATGGTTTTTCATCACCTTCTGGTAACCAGTTGGAACCTGAAACTGATTTAGATCTGTTCTCAAAATCTCAAATTGGTGAACAGGATGCAGAATTCCCACTCAGAGAGGAGAAAAACTTTGCCTCTGAAAAACCTCAATTTCAGCAGATGCAGAAATATCAATTGGAGCAAGAAAGCACTAATGCTACTTCTGACTGCGTATCAGAAATCCATGCAGATGAGCCATCATCATTTTATTCCTTGCCACAGTCATCTAGCCAGGAGAATAATGCTGCAAAACGTGTCATGGATCCATTGAAGCCTCTTCTTCCTAACCTCTTTCCCAAGGCAACTGAAAATAAACTTGATGAGATGCCACCCATGCCTCCTCTACCGCCTATGCAATGGAGAATGGGCAAGGTTCAACATGCTTCCCTAGCTTCGCAAAGAGAAGAGTTAGAAGTAAGTCAGGTCTCAGTCCAGCCAAATAGACCTGATAAACAATCTCTATTTGGTTTGCCAACTTCTGAGAGAGAGACCTTGTATCAGAATCCTTTTTTGCCTGTCATGGCTTTGGAAAGTGATAAGCTCCAACATTCTTCTGGGTTTGCTGTTGGTGTTTCAGGGCACCCTGTTGCTATACCTTTTCAATTTCCTATCATGGTTAATGAATCAAAAGGTCAATATAATTACCTATTGCTGGACAGCAACCAAATTCAAAACCCCTTGTTAACATTACCCGTGGCATCTATGGGCATGCCTCCTCAAGGTTTCATTGTTGCTCCTGAGGGAGAAGTGATACAGAATTCAAACCCATGCGCACCAATACCATCTGCTGCATATGCTGTTTTAGGACACAATTCCATCCCTCCACAAGAAAAATCAACTCAACCTCCACATCAGTTAATGATGGAGACTACTCCAGATGATAAATCACTTCAACAGAGTATGAGTAATATGGTATCTATGGACAGGCCTCCACATGGTCATGCAGTTGCTTCTGAGGGAGAAATGGAACTGAACTCAAACCCAGGCCCTACAATTCCACCGGCTGAATGTGCTGTTTCTGGACATGATTCTCTCTCACCTCAAGAAAAACTGACTCAACCTCCAAGTCAATTACTGATGGAGCATAGTTCTGATGATAAAACACTTCTGCAGTTTGTAACTAATGTGGTGTCTATGGACAGTTCTAACAGTCACATTGTTTCTTCTGAGGGAGAAATGGAACAAAGTTCTAACCCAGACCCTCCAACTCCACCTGTTGAATGTGCTGTTCCTGGACCTGGACATGATTCTATCTCTTCTCATGAAAACCCGACTAAACCTCCAAGTCAATTAATGTCAGAGACTAGTTCTGAATTTAAAACACTTCAGCAGTCTATAAGTAATGTGGAAGGGGAACAAGGACATCTGCCTATCTCATTCATGTCTCCACCAAACATGGAAAGTATGGAGCCTAATCAGAGTTTCCTGCCCTTTGAGGGGGGAATGGAGATGTCCTTGGATACGTCTGATCATACATCAGATCTTGAGAGTGAAAGGACAAATGGAAAACCAAAGAATAAACTTCCTCGTCCTCGTAATCCTCTAATTGATGCTGTTGCTGCTCATGACAAAAGCAAGCTTAGGAAGGTTACTGAACGGGTTATGCCTCAAATTGCACCAAAGGTAGATGAAAGAGATTCTTTACTAGAACAGATAAGAACAAAGTCCTTCAACTTGAAGCCTGCTGTGACTACACGACCTAGCATTCAAGGTCCAAAAACAAATTTGAAGTTTGCTGCCATCTTGGAGAAAGCAAATGCAATTCGCCAGGCTTTGGCTGGAAGTGATGAAGATGATGATGCAGATTGGAGCGATTCTTGA 5085 0.4134 MPLSKYRVRNEYSLADPELYRAADKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMATAARGHGLMARVKQLEAEVPSLEKAFFSQTHHSSFYTNGGIDWHPNLRFEQNLVTRGDLPRFIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKMESTSSVTATIEVQREKRIRKVKLKKGARLRDGETPNAVPSHAKLHQLLLEERIENGYSNPARRVKLKKRQLNGPAVETRDGKSYMEKFLETPSPDHKMVCETSIFPLPVKQTPYDTSEAGIKILEISSISPVKKSLGNKNTYSSPDENELELKPFSEMDGGTNEDLVKVKEQISDGVTDKKSSNHLKLPDAAELAINEQKKIEGSLDGHHSDDVTSEVDNYMDALTTMESELETDNEYKPKNSFLNIQKAANTNDKEEHQLQAQFSDSQSFGDSSMSDDSSSFNQDRNEEHIKVEAQSSDSQSTGTSSTLDDNSSFRRDGNGQHREPQAHFSDSQSVGSSSTSDENFKKDKSYLPHSDSLTTAVENIQSEPILFTNAKCCELKVEDAPSNQLPQNVEFQHTDCERFVMHDDAPVHEEEISSDLGQASSDLMTSGQVLCSNLGSTLPVILPAATQSDETPSAPAELNLRLDDDNADRTGLVESISSKPVSLSLTDDAHPVGSSAKTSLDNLDDDDPYIHCDDLLQVLNDLELAHGDECSDHSEIKMSQAEPPKENPSKILVNRDIGSPVEDPVSPSMEELNLNSGATLAHDCQDSKDEDCTVTTQLNSETPVSPLSCFTGGLLSDSTHNNTQDEPGSAEIEVSSSDLQSKVGEIPKMVHDDEINGSTFSVNPVEDDGHFKRSSPDNHVMVNDLVTENVQSDDQAVYSAPSVDSAENDEGVVSCPASSQICSPSRGLSDLEEPPLSSHSYPMEIKSNEVELTQIAMVTNAEKSENQSAPLLDVASSDVVNSSLSNITKLEESLSTFADSQKKEIEVDEAVARDSLTELEEQKIVDQPEIASVDVQLNLNKLVPFDLPDSEICNNIQKSSPREKFQHGAFVDDAEMVPKFLGLDAQQSESLSYGLHDPLQNDRDGFSSPSGNQLEPETDLDLFSKSQIGEQDAEFPLREEKNFASEKPQFQQMQKYQLEQESTNATSDCVSEIHADEPSSFYSLPQSSSQENNAAKRVMDPLKPLLPNLFPKATENKLDEMPPMPPLPPMQWRMGKVQHASLASQREELEVSQVSVQPNRPDKQSLFGLPTSERETLYQNPFLPVMALESDKLQHSSGFAVGVSGHPVAIPFQFPIMVNESKGQYNYLLLDSNQIQNPLLTLPVASMGMPPQGFIVAPEGEVIQNSNPCAPIPSAAYAVLGHNSIPPQEKSTQPPHQLMMETTPDDKSLQQSMSNMVSMDRPPHGHAVASEGEMELNSNPGPTIPPAECAVSGHDSLSPQEKLTQPPSQLLMEHSSDDKTLLQFVTNVVSMDSSNSHIVSSEGEMEQSSNPDPPTPPVECAVPGPGHDSISSHENPTKPPSQLMSETSSEFKTLQQSISNVEGEQGHLPISFMSPPNMESMEPNQSFLPFEGGMEMSLDTSDHTSDLESERTNGKPKNKLPRPRNPLIDAVAAHDKSKLRKVTERVMPQIAPKVDERDSLLEQIRTKSFNLKPAVTTRPSIQGPKTNLKFAAILEKANAIRQALAGSDEDDDADWSDS* 1695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1093 1694 Coils Coil 978 998 - -
Gso1g1093 1694 Gene3D - 1603 1693 - -
Gso1g1093 1694 Gene3D - 103 219 - -
Gso1g1093 1694 MobiDBLite consensus disorder prediction 1471 1602 - -
Gso1g1093 1694 Gene3D - 1 90 - -
Gso1g1093 1694 MobiDBLite consensus disorder prediction 423 524 - -
Gso1g1093 1694 MobiDBLite consensus disorder prediction 466 485 - -
Gso1g1093 1694 PANTHER WASP-1 1 520 IPR028288 GO:0005856|GO:0030036
Gso1g1093 1694 PANTHER WASP-1 551 1379 IPR028288 GO:0005856|GO:0030036
Gso1g1093 1694 PANTHER WASP-1 1392 1694 IPR028288 GO:0005856|GO:0030036
Gso1g1093 1694 MobiDBLite consensus disorder prediction 707 737 - -
Gso1g1093 1694 MobiDBLite consensus disorder prediction 1070 1095 - -
Gso1g1093 1694 ProSiteProfiles WH2 domain profile. 1632 1650 IPR003124 GO:0003779
Gso1g1093 1694 MobiDBLite consensus disorder prediction 303 331 - -
Gso1g1093 1694 MobiDBLite consensus disorder prediction 1079 1095 - -
Gso1g1093 1694 MobiDBLite consensus disorder prediction 1471 1485 - -
Gso1g1093 1694 MobiDBLite consensus disorder prediction 496 512 - -
Gso1g1093 1694 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 551 1379 - -
Gso1g1093 1694 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 520 - -
Gso1g1093 1694 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1392 1694 - -
Gso1g1093 1694 MobiDBLite consensus disorder prediction 1506 1540 - -
Gso1g1093 1694 MobiDBLite consensus disorder prediction 831 853 - -
Gso1g1093 1694 MobiDBLite consensus disorder prediction 792 815 - -
Gso1g1093 1694 MobiDBLite consensus disorder prediction 1407 1441 - -
Gso1g1093 1694 MobiDBLite consensus disorder prediction 432 451 - -
Gso1g1093 1694 MobiDBLite consensus disorder prediction 1577 1593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1093 Gso-Chr1 44630280 44638155 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1093 - - gmx:100814240 3271.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1688 18 48982954 48990439 Gso1g1093 1 44630280 44638155 PCT
Gso9g2311 9 47389932 47396915 Gso1g1093 1 44630280 44638155 PCT
Gso1g1093 1 44630280 44638155 Gso18g1688 18 48982954 48990439 PCT
Gso1g1093 1 44630280 44638155 Gso9g2311 9 47389932 47396915 PCT