Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1088 ATGATTCGCCAACACAACCATAAAACCGGTTTCCAAAATAAAAAGTTCGGACACATTCACAACAAACTTTGCGTGCTTCTTCTTCACTTTGGTCTTCATTTATCAATTCATTGTTGTTTAAACTTTAAACCTTGGAATCCAAAGAGTGTCATGGAAGACCAGAAAGAGAAGATTTCAGTTTCGGAAAATTTAGAAATGAACATTGACGTGCAGCCAGAGCTGTTTGTGGACAAACATGAGCCGGAAACGGGTGGCGACACCACCGGCATCCTACGGCGGTGGAAGAGGAAAGAAATGCTAAGGAGAGGCTCTTTAGGGCTAAGAGGAATTGCTCTATTTATGTCTTTGATTTCACTCATTCTTACGGCTAGTAACAAGCATGGTTATTGGAATTTTGACAAGTTCGAAGAATACAGATACATGCTGGCTGTGGCAGCTCTATCTAGTTTGTACACTGTGGTTCAAGTGTTTCGTCAAGTTCATGAACTTTTCACGGGGAAAAGCCTGATGCGGCCAAAAACTGAAGGGTTGATTGATTTTGTTGGGGATCAGGTTGTGGCATATCTCTTGATATCATCAACGTCTTCAGCGATTCCACCAACAGATAGAATGAGGGAAGTTACCACCAATATATTTACGGACTCTGCAGCTGCAGGCATTGCCTTTTCCTTTTTTGCATTTTGCTGTCTAGCACTGTCAGCTGTTATATCAGGATACAAACTCTCTACCCAAACTTATACTCCTATGAACATCCTTGATAGTTAA 765 0.4131 MIRQHNHKTGFQNKKFGHIHNKLCVLLLHFGLHLSIHCCLNFKPWNPKSVMEDQKEKISVSENLEMNIDVQPELFVDKHEPETGGDTTGILRRWKRKEMLRRGSLGLRGIALFMSLISLILTASNKHGYWNFDKFEEYRYMLAVAALSSLYTVVQVFRQVHELFTGKSLMRPKTEGLIDFVGDQVVAYLLISSTSSAIPPTDRMREVTTNIFTDSAAAGIAFSFFAFCCLALSAVISGYKLSTQTYTPMNILDS* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1088 254 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 80 246 - -
Gso1g1088 254 PANTHER CASP-LIKE PROTEIN 4B1 80 246 - -
Gso1g1088 254 Pfam Casparian strip membrane protein domain 100 229 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1088 Gso-Chr1 44505254 44507622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1088 84 197 Miscellaneous Gene Families AT1G79780 25.600 6.05e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1088 - - gsj:114416637 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1685 18 48945179 48947835 Gso1g1088 1 44505254 44507622 PCT
Gso9g2315 9 47415175 47418018 Gso1g1088 1 44505254 44507622 PCT
Gso1g1088 1 44505254 44507622 Gso18g1685 18 48945179 48947835 PCT
Gso1g1088 1 44505254 44507622 Gso9g2315 9 47415175 47418018 PCT