Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1071 ATGTCCTCCACCGCGGCTCCCGTCCTTCCCATATCCAACCCCCAAACCACCGCCGCAGGCGGCGGCGCCATCGAGGCTCCGGCGAACAACCCGGCCTTCCGCGCCTTCATCAACAACCTCTCCGCGTCCCTCCGACACGGCCTCGACCAGCGCCGCCCGTGGTCGGAGCTCGGGGACCGCTCCGCGTTCTCGAAGCCCGAGTCCTTCTCCGAAGCCACCCTCCGCGTCCGCAAGAACTTCTCCTACTTCCGCGTCAACTACTACGCCGTCGTTTCACTCATTCTCGCAGTCTCTCTCCTCACCAATCCTTTCTCTCTCATCCTCCTCGTCGGCCTCCTCGCCTCCTGGACCTTCCTCTACCTCTTCCGTCCGTCAGATCAACCACTCGTTATTCTTGGCAGAACTTTTTCAGATTTCGAAACCCTAGCGCTCCTCTCCGCCTTCACCGTCTTCGTCGTCTTCCTCACCAGCGTTGGATCTGTTCTCGTCTCCGCTCTCATGCTTGGCGTCGCCGTCGTCTGCCTCCACGGCGCGTTCCGCGTGCCGGAGGATCTGTTTCTTGACGACCAGGACAACTCTCAGGCCACCGGATTCCTCTCCTTCCTCCGCGGCCCTGCCGCCTCCGCCACCGCTGTTCCCACCGTTGCCGCACGCGTTTAA 660 0.6258 MSSTAAPVLPISNPQTTAAGGGAIEAPANNPAFRAFINNLSASLRHGLDQRRPWSELGDRSAFSKPESFSEATLRVRKNFSYFRVNYYAVVSLILAVSLLTNPFSLILLVGLLASWTFLYLFRPSDQPLVILGRTFSDFETLALLSAFTVFVVFLTSVGSVLVSALMLGVAVVCLHGAFRVPEDLFLDDQDNSQATGFLSFLRGPAASATAVPTVAARV* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1071 219 PANTHER PRA1 FAMILY PROTEIN-RELATED 1 218 - -
Gso1g1071 219 Pfam PRA1 family protein 48 189 IPR004895 -
Gso1g1071 219 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 1 218 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1071 Gso-Chr1 43962214 43963217 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1071 K20359 - gmx:100804273 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1670 18 48733183 48734862 Gso1g1071 1 43962214 43963217 PCT
Gso7g1331 7 19317500 19318385 Gso1g1071 1 43962214 43963217 PCT
Gso1g1071 1 43962214 43963217 Gso18g1670 18 48733183 48734862 PCT
Gso1g1071 1 43962214 43963217 Gso7g1331 7 19317500 19318385 PCT