Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1056 ATGGATCAGATATTCAACAAGGTCGGATCCTATTGGTTCAACCAGAAAGCCTCCAGCCAGCTCAATTCCGTTGGTGATGACATCAATTCGATGACAAACAGTATTGAAGGGGGAACCAAATGGTTGGTCAACAAAATAAAAGGAAAGATGCAAAAGGCATTGCCAGAGTTGCTAAAGGAGTACGATCTACCAATAGGAATCTTTCCTCGTGATGCAACAAACTATGAATTCAATGAAGAAACAGGAAAGCTTGTTGTTTACATTCCTCAAGTATGTGAAGTTGGCTACAAGGATTCATCAGTCTTGCGTTTCTTCACCACCGTGACTGGTTATCTGGAGAAAGGAAAGTTAGCAGACATAGAAGGAATGAAGACAAAAGTATTGATCTGGGTGAAAGTAACAACCATTTTGTCAGAGGGATCGAAGCTCTATGTGACAGCTGGCATGAAGAAAACAAGGAGTAGGGAAGCGTACGAGGTTACAAGAGATGGTGTATGCATAGATAAGTTCTAA 513 0.4113 MDQIFNKVGSYWFNQKASSQLNSVGDDINSMTNSIEGGTKWLVNKIKGKMQKALPELLKEYDLPIGIFPRDATNYEFNEETGKLVVYIPQVCEVGYKDSSVLRFFTTVTGYLEKGKLADIEGMKTKVLIWVKVTTILSEGSKLYVTAGMKKTRSREAYEVTRDGVCIDKF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1056 170 PANTHER T31J12.3 PROTEIN-RELATED 3 170 IPR007493 -
Gso1g1056 170 Pfam Protein of unknown function, DUF538 56 159 IPR007493 -
Gso1g1056 170 Gene3D - 32 170 IPR036758 -
Gso1g1056 170 SUPERFAMILY At5g01610-like 2 169 IPR036758 -
Gso1g1056 170 PANTHER DUF538 FAMILY PROTEIN 3 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1056 Gso-Chr1 43465435 43471768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1056 - - gmx:100500143 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1319 7 19171206 19174793 Gso1g1056 1 43465435 43471768 PCT
Gso1g1056 1 43465435 43471768 Gso7g1319 7 19171206 19174793 PCT