Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1053 ATGGCTTCCATCAACTTCAACCCCTTCGGTGGAAACTGGTTCTCAAAACCCCCTAATCCCCTCCCTCTCCCTTCCCTCCCCAACACCCTCACCGACGCACCCTCCCTCCCTCCCAACTTCGCCGCAATCTCCCTCCCAAACCCCTTCCGCCGCAGGCCCAAGCCCAAGTCCGCCGAGCCCACCGAACCCGGGCCCTACGAGCAGCTGGCCCGGCAGGTCCTCTGGGAGTGCGAGACCCTCCCGGACCACCGCCACACCCCGGAGGTCGATAAGATCCTCGCCGACAATGACGCCGCCTTCGGCGGCGACGACGACTCCGTTTTCGTCCGCCGCGAGGACGCAACGGACGAGGAGGTGCGGGAGAACGCGGAGCTCGTGGAGCGGCTCCGCAGCAGCCCCGTGGTGCAGTTCATGGCGCGCGCCGAGGAGATTCTGGACAAGATGAACGAGATGGAGCTGAAGGAGAACGAGAGGCCGTACCACAAGGAGGATTGGGAGGTGTGGAAGAATGTGCCCAATGTTATTGGGCTTGACGGGAGGCCCATGCCCAGAAAAGCCCAGAAAACCCGCGAGGAGGCTGATGATAAGTTTTGGGATTTCGCTAGGCAGTTCTTTTTCGGGCTGTGGAATTTCAGGCAGAGGCCCTACCCTCCTGGGAAGCCCATTGACGCGGCCCAGTCTATTGGGTATAAGAACCTTGAGAGGCGCTACTATGACTTTATCATGAGAAGTGGTGGGTGGTACTATAAGGATCGGCTGGGTCGCACTCGAGGACCGTTAGAATTGATTACGCTTAAAACTGCATGGGGTGCTGGGATTATTGATAAGAACACTTTCATTTGGGGAGAGGATATGGACGAATGGGCGCCCATCCATATGATTTATGGAATGGAGCGTGCAATCGCCACTTGGGAAGTTAGACTTGCTGCTTCCGCAACAGCATTGCTTCACAAACTACAGAAAGGTATACCACCGTGGGTTCCTTTGAAGGGATTTGAAAAGAAGACTTATAAGCAACTTCAAGAAGAGGCTATAGAAAGCAAGAGACGTGATTTAGCAGTATTGGAAGCTAATGATGGTCTTTGGCCTGGAGCTAAAATTCCAAGTCATGCCCTATTTCTTTGGGCTAGTGGCTCTGAACTGACCACTATATTGGAACAGGATCACATGCCCAACAAATACATTCCCAAATATCTTAGAAAGAAGTTGGCTGAAATTATTCCAGGGTTGAGGCCATGGGAAGTTCTGAGCATAGAACAAGCAATGGATCGATTAACATTTAACGGGGAATGGTACCGTGAACCACTTGGTTCATTCACCACTGGTCCCCCATACCTTGAGCACTGGAATAGAGATGTTATGAGGTTGTATAAGATATTTGATGATCTTAACACCGAGTTGTACGAACATATGGAGAATTCAATTGCTGGCTTTGATAAAATTATGGAGAAGATCAGGGATGATTTTATTGCGAGAACTGATAAAATGTTGGAGAAGAAAGACAAAGAGAAAAGAGAAGCTCGGAAGAAAGCTGGGTTGCCTGAGTATCAATGGCCCGAAAAACCATATGTTCCTTAG 1578 0.512 MASINFNPFGGNWFSKPPNPLPLPSLPNTLTDAPSLPPNFAAISLPNPFRRRPKPKSAEPTEPGPYEQLARQVLWECETLPDHRHTPEVDKILADNDAAFGGDDDSVFVRREDATDEEVRENAELVERLRSSPVVQFMARAEEILDKMNEMELKENERPYHKEDWEVWKNVPNVIGLDGRPMPRKAQKTREEADDKFWDFARQFFFGLWNFRQRPYPPGKPIDAAQSIGYKNLERRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKNTFIWGEDMDEWAPIHMIYGMERAIATWEVRLAASATALLHKLQKGIPPWVPLKGFEKKTYKQLQEEAIESKRRDLAVLEANDGLWPGAKIPSHALFLWASGSELTTILEQDHMPNKYIPKYLRKKLAEIIPGLRPWEVLSIEQAMDRLTFNGEWYREPLGSFTTGPPYLEHWNRDVMRLYKIFDDLNTELYEHMENSIAGFDKIMEKIRDDFIARTDKMLEKKDKEKREARKKAGLPEYQWPEKPYVP* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1053 525 Pfam GYF domain 2 247 293 IPR025640 -
Gso1g1053 525 MobiDBLite consensus disorder prediction 500 515 - -
Gso1g1053 525 Coils Coil 490 510 - -
Gso1g1053 525 PANTHER PROTEIN TIC 56, CHLOROPLASTIC 1 515 IPR037471 -
Gso1g1053 525 MobiDBLite consensus disorder prediction 500 525 - -
Gso1g1053 525 Coils Coil 338 358 - -
Gso1g1053 525 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1053 Gso-Chr1 43385219 43392307 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1053 - - gmx:100801248 1073.92