Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0948 ATGACTAACATCATTTCAGGGCAGAAGACTGGTGGACAATATTTGGTTGGTGGACTTGATTGTACAGTGCATATAAATTTCTTTGGCAGCCAGATTCAAAGCTTTGAGGCAGAGCTTTTAGTGCCAGAGCTTGTCTCCAAGGAAGGAGGTCCTGAATCATTTTGTGGAATTTTTATTCATGCCCCTGCAATTCTTGAAGCAGGGCCAAAAGTTCAAGTGCTGGCTGATTATCCTGATTCATTGGAGGACCAGGCCTCACAGGGTTCCTTTGCAGCCCATGGATGTCAGGATGTACTGATTGCTGCAATTGGGCAACCAGAACACCCTGGTTATATGCGTGCTGCTAGAGCCGGTGTCACGATCAAGAAATACTTTGGACCAGCTCCAAGGACCTCCAGCACGTCTTCCTCCATGGCTCCCGAAGACCTGGGGCAGCTGCCACAATAA 447 0.481 MTNIISGQKTGGQYLVGGLDCTVHINFFGSQIQSFEAELLVPELVSKEGGPESFCGIFIHAPAILEAGPKVQVLADYPDSLEDQASQGSFAAHGCQDVLIAAIGQPEHPGYMRAARAGVTIKKYFGPAPRTSSTSSSMAPEDLGQLPQ* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0948 148 Gene3D - 1 117 IPR029062 -
Gso1g0948 148 ProSiteProfiles PdxT/SNO family profile. 1 148 IPR002161 GO:0004359|GO:0042819|GO:0042823
Gso1g0948 148 MobiDBLite consensus disorder prediction 128 142 - -
Gso1g0948 148 PANTHER PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO 3 79 IPR002161 GO:0004359|GO:0042819|GO:0042823
Gso1g0948 148 MobiDBLite consensus disorder prediction 128 148 - -
Gso1g0948 148 Pfam SNO glutamine amidotransferase family 16 81 IPR002161 GO:0004359|GO:0042819|GO:0042823
Gso1g0948 148 PANTHER - 3 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0948 Gso-Chr1 38440470 38468759 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0948 K08681 - gmx:102667909 296.204