Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0945 ATGTATTCTCATTGGGTTCGATTGATGCTTCTCATTGCTTGCATTCTTCCAGCTTTGGTTGAATGCAGAGTGAGGCACTACAAATTTCATGTGGTGTCTAAACAAACTAATAGATTGTGTTCAAGCAAATCTATTGTCACCATTAATGGCAAGTTCCCGGGACCCACTCTTTACGCCAGGGAAGACGATACAGTGTTGGTCAAAGTCATCAACCAAGTCAATCACAACGTTACCATCCATTGGCATGGTGTGAGGCAATTGAGAACTGGTTGGGCTGATGGACCTGCATATGTCACACAGTGCCCAATTCAACCAGGGCAAACCTATGTATACAATTTCACACTCACAGGGCAAAGAGGAACACTTTTGTATCATGCACATGTTAATTGGCTAAGGTCAACTCTCTATGGTGCCTTGGTTATCTTGCCAAAGAGAGGTGTGCCTTATCCTTTCCCAAAACCAGATGATGAGTTGGTTGTGGTATTAGGAGAATGGTGGAAATCTGATACAGAAGCTGTAATCAATGAAGCACTCAAATCAGGATTGGCACCAAATGTCTCAGATGCTCATACTATTAATGGCCTTCCAGGGACAGTTACCAATTGTTCTACACAGGATGTTTACAACCTGCCCGTGGAGAGTGGAAAGACCTACCTTTTGAGAATTGTCAATGCTGCACTCAATGAGGAGCTATTCTTCAAAATTGCTGGCCACAAGCTCACTGTGGTAGAAGTTGATGCCACATATGTAAAGCCATTCAAGATTGAAACAATTGTGATAGCCCCTGGCCAAACCACCAATGTGCTTCTAAATGCAAACCAAAAATCTGGCAAGTACTTGGTAGCAGCTTCTCCATTCATGGATGCTCCTGTTGCTGTGGATAACTTGACTGCCACAGCAACATTGCACTACACAGGCACTCTTGCTGCCACCCCCACAATTCTCACCACCCCACCTCCCAAAAATGCTACCCAAATTGCCAACAACTTCATCAGCTCTCTTAGAGGCCTTAACTCCAAGAAATACCCTGTCAATGTCCCATTAACAGTTGATCACTCACTTATCTTCACTGTTGGGTTGGGAATTAACCCTTGTCCATCTTGCAAAGCTGCAAATGGGAGCAGGGTGGTGGCTGCTATCAACAATGTTACATTTATTATGCCAACCATTGCCTTACTTCAAGCACATTATTTCAACATCAAAGGGGTGTTCACCACTGATTTCCCTGCCAATCCACCCCATGTTTTCAACTACTCAGGGCCTGGACCAGCCAATTTGAACACCGAAACCGGCACAAAGGTTTACAGGCTACCATTCAACGCCACAGTTCAGGTGGTGCTACAAGACACAGGAATCATTGCACCTGAGAACCACCCAGTTCATCTTCATGGGTTCAATTTCTTTGTTGTTGGAAGAGGAGTAGGCAATTTCAACCCCAAAATTGACCCTAAGAACTTTAACCTTGTTGATCCTGTTGAAAGGAACACTATTGGAGTACCAGCTGGAGGGTGGACTGCATTTAGATTCAGAGCAGATAATCCAGGAGTTTGGTTCATGCACTGCCACTTGGAGGTACACACAACATGGGGACTAAAGATGGCCTTTTTGGTGGACAATGGCAAAGGTCCTAAGCAATCAGTGATACCCCCACCAAAAGATCTTCCCAAATGCTAA 1674 0.445 MYSHWVRLMLLIACILPALVECRVRHYKFHVVSKQTNRLCSSKSIVTINGKFPGPTLYAREDDTVLVKVINQVNHNVTIHWHGVRQLRTGWADGPAYVTQCPIQPGQTYVYNFTLTGQRGTLLYHAHVNWLRSTLYGALVILPKRGVPYPFPKPDDELVVVLGEWWKSDTEAVINEALKSGLAPNVSDAHTINGLPGTVTNCSTQDVYNLPVESGKTYLLRIVNAALNEELFFKIAGHKLTVVEVDATYVKPFKIETIVIAPGQTTNVLLNANQKSGKYLVAASPFMDAPVAVDNLTATATLHYTGTLAATPTILTTPPPKNATQIANNFISSLRGLNSKKYPVNVPLTVDHSLIFTVGLGINPCPSCKAANGSRVVAAINNVTFIMPTIALLQAHYFNIKGVFTTDFPANPPHVFNYSGPGPANLNTETGTKVYRLPFNATVQVVLQDTGIIAPENHPVHLHGFNFFVVGRGVGNFNPKIDPKNFNLVDPVERNTIGVPAGGWTAFRFRADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPKQSVIPPPKDLPKC* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0945 557 CDD CuRO_3_LCC_plant 403 540 IPR034289 GO:0005507
Gso1g0945 557 CDD CuRO_2_LCC_plant 159 304 IPR034285 -
Gso1g0945 557 CDD CuRO_1_LCC_plant 27 143 IPR034288 GO:0005507
Gso1g0945 557 ProSitePatterns Multicopper oxidases signature 2. 520 531 IPR002355 GO:0005507
Gso1g0945 557 SUPERFAMILY Cupredoxins 347 557 IPR008972 -
Gso1g0945 557 Pfam Multicopper oxidase 409 540 IPR011706 GO:0005507|GO:0016491
Gso1g0945 557 Gene3D - 22 146 IPR008972 -
Gso1g0945 557 ProSitePatterns Multicopper oxidases signature 1. 515 535 IPR033138 -
Gso1g0945 557 PANTHER MULTI-COPPER OXIDASE 6 557 IPR045087 -
Gso1g0945 557 Gene3D - 366 557 IPR008972 -
Gso1g0945 557 PANTHER LACCASE 6 557 - -
Gso1g0945 557 SUPERFAMILY Cupredoxins 17 168 IPR008972 -
Gso1g0945 557 Pfam Multicopper oxidase 33 144 IPR011707 GO:0005507
Gso1g0945 557 SUPERFAMILY Cupredoxins 151 319 IPR008972 -
Gso1g0945 557 Pfam Multicopper oxidase 157 306 IPR001117 -
Gso1g0945 557 TIGRFAM laccase: laccase 22 557 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gso1g0945 557 Gene3D - 154 339 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0945 Gso-Chr1 38210987 38215239 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0945 K05909 - gmx:100779825 1128.24