Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0943 ATGGGAGATGTCAAAAAATCACATGATGAGGCAGAAGATAGTTTATACACAGAAGATGGGACAGTTGATATTTACAAAAAGCCTGCCATCAAGAAAAAAACTGGAAATTGGAAAGCATGCCGCTTCATACTTGGAAATGAATGCTGTGAAAGATTGGCATATTATGGCATGAGTACAAACCTAGTGAACTATCTGCAGACCCGTTTCCATCAAGGAAATGCAACTGCTGCAACTAATGTCTCAACCTGGTCAGGGACATGCTACATCACCCCATTACTTGGAGCCTTTTTAGCTGATTCATACATGGGAAGATACTGGACAATTGCTAGTTTCTCAACTATCTATGTCATAGGAATGTCACTTTTAACCTTTTCTGCTATTGCCCCTGGATTAAAGCCTTCATGTGGTGCTAATGGTTGCTATCCGACATCAGGACAAACTACAGCTTGCTTTATAGCACTCTACTTGATTGCTCTTGGAACTGGTGGTATCAAACCATGTGTCTCATCTTTTGGTGCTGACCAATTTGATGAAAATGATGACTTTGAGAGGAAAAAGAAGAGCTCTTTTTTCAATTGGTTTTATTTCTCAATTAATATCGGTTCGCTCATTGCTTCCTCAGTGTTAGTTTGGATACAGATGAATGTGGGTTGGGGTTGGGGATTTGGAGTACCTACTGTAGCAATGGTCATTGCAATTACATTTTTCTTTATTGGAAGTAAATGGTACAGACTTCAACTGCCCGGTGGTAGTCCCCTTACAAGGATTTGTCAGGTTATAGTGGCAGCATCCAGGAAAGCTAGGCTACAAGTGCCAGATAATAAGTCTCTTCTTTATGAGACTGCAGATGTAGAGTCTAATATCAAAGGGAGCCGCAAACTTGGACACACAAATGAGTTAAAGTGTTTGGACAAGGCAGCAATAGAGACAGAATCTGACCACACTAATTGGCCAAATTCATGGAGGCTGTGCACAGTGACACAAGTTGAGGAGCTCAAATCCATAATTCATTTGCTCCCAGTTTGGGCAACCATGATTGCCTTTGCAACCGTGTACAGTCAAATGAGCACCATGTTTGTGTTACAAGGCAACAAAATGGACCAACACATTGGTCAACACTTCACAATTCCCTCAGCATCCCTCTCCCTCTTTGACACCCTTAGTGTCATCTTCTGGGCCCCAGTGTATGATCGCATGATTGTCCCATTTGCAAGAAAGTTCACTGGCCATGAACAAGGATTCACACAGCTTCAACGCATAGGCATCGGCCTTGTCATCTCCATCATCTCCATGATTGTTGCTGGCATTTTAGAGGTTGTTCGCCTTGATATTATCAGAAAAAACAACTACTATGATCTTGAAACCGTTCCCTTGTCAATCTTCTGGCAAGTGCCTCAGTACTTCCTTATAGGAGCTGCAGAGGTTTTCACAAACATTGGTCAAATGGAGTTCTTTTATGGAGAGGCTCCTGATGCTATGAGAAGCTTGTGTTCGGCTTTGCAACTCACTACAAATGCATTGGGAAATTATGTGAGTACTTTGCTTGTTTTAATTGTGACAAAAGTCACCACAAGCCATGGAAGAATTGGTTGGATCGCAGACAATCTAAACAAGGGTCATCTTGATTACTTCTACTGGCTTTTGACAGTTCTTAGCTTGCTTAACTTCCTTGTGTATCTGTGGATTGCAAAGAGGTATAAATACAAAAAGGTTACAACAAATACTCATTGA 1731 0.4136 MGDVKKSHDEAEDSLYTEDGTVDIYKKPAIKKKTGNWKACRFILGNECCERLAYYGMSTNLVNYLQTRFHQGNATAATNVSTWSGTCYITPLLGAFLADSYMGRYWTIASFSTIYVIGMSLLTFSAIAPGLKPSCGANGCYPTSGQTTACFIALYLIALGTGGIKPCVSSFGADQFDENDDFERKKKSSFFNWFYFSINIGSLIASSVLVWIQMNVGWGWGFGVPTVAMVIAITFFFIGSKWYRLQLPGGSPLTRICQVIVAASRKARLQVPDNKSLLYETADVESNIKGSRKLGHTNELKCLDKAAIETESDHTNWPNSWRLCTVTQVEELKSIIHLLPVWATMIAFATVYSQMSTMFVLQGNKMDQHIGQHFTIPSASLSLFDTLSVIFWAPVYDRMIVPFARKFTGHEQGFTQLQRIGIGLVISIISMIVAGILEVVRLDIIRKNNYYDLETVPLSIFWQVPQYFLIGAAEVFTNIGQMEFFYGEAPDAMRSLCSALQLTTNALGNYVSTLLVLIVTKVTTSHGRIGWIADNLNKGHLDYFYWLLTVLSLLNFLVYLWIAKRYKYKKVTTNTH* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0943 576 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 21 572 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso1g0943 576 PANTHER PROTEIN NRT1/ PTR FAMILY 8.1 21 572 - -
Gso1g0943 576 Gene3D MFS general substrate transporter like domains 8 575 IPR036259 -
Gso1g0943 576 SUPERFAMILY MFS general substrate transporter 28 569 IPR036259 -
Gso1g0943 576 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 2. 191 203 IPR018456 GO:0006857|GO:0016020|GO:0022857
Gso1g0943 576 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 94 118 IPR018456 GO:0006857|GO:0016020|GO:0022857
Gso1g0943 576 Pfam POT family 105 532 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0943 Gso-Chr1 38025640 38029687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0943 12 576 Organic Solute Cotransporters AT3G54140 73.415 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0943 K14638 - gmx:100779289 1156.74