Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0910 ATGAGGGGGGTGTTTCTTCCATGGAACCCACCTTGCTTCCACGACGCACTCCATCTCCCTTCCGTCTCACTCCTGCCAACGAGACCCTTCTTCTTCACCCTCTCAGCCTCCTCCACCCCCTCAGCGCCCGTGGAGTCCGCGTCGCAGCTCAGCGCGCGCGAGAGGAGGCGCGCGAGGAGCGAGAGGAGGGAGACGAGGAGCGGCGCGAAGAACTGGAGGGAGGTGGTGGAGGAGAGGCTCATGGAAAAGCCCAAGAAGCAGAAGGGCTCGTGGATGGACGAGCTGAACCTCGACAATCTCGCCAAGCTGGGTCCACAGTGGTGGGTCATTCGGGTCTCCAGGGTTAAGGGAAACGACATTGCGCAACTCCTCGCTCGCTCGCTCGCCAAGAATTATCCCGATATGGAGTTTAAGATATATGCTCCATCTGTCAATGTGAAAAGGAGATTGAAGAATGGCTCCTACTCCGTTAAACCAAAGCAACTGTTCCCAGGTTGTGTTTTCTTGAGATGTGTGATGAACAAAGAACTACATGACTTCATAAGAGAGTATGATGGTGTTGGAGGCTTTCTTGGTTCCAAGGTTGGAAACACAAAGAGACAGATCAATAGACCGAAGCCAGTGTCTGCTGAAGATATGGAGGCTATCTTCAGACAAGCAAAAGAAGAACAAGAGAAAACTGACCAAGCTTTTGAGCAAGAAGAGAAAAAAGCTGCCCTAGACTCTGGGATTCGCAATACAGAATTAGAACCCGATGATATTTTAAATGCTATTGTTGATTATAAGTCTAAAAGGGGATCTAGAAAAGCTTCTAACCAGGTCAAAGCCACAGATGCTTCATCTACTCGAATCAATTATAAACTCCTTGTTCCAGGTTCCACCGTTCGTGTTCTATCTGGAACATTTTCAGGGTTTACAGGCACCCTCAAGAAGCTGAATCGAAAAACCAAATTGGCCACTGTGCATTTCACTCTATTTGGGAAAGAGAACATAGCAGACATAGACGCTAATGAAATTGCTATAGAGACAAACTGA 1035 0.485 MRGVFLPWNPPCFHDALHLPSVSLLPTRPFFFTLSASSTPSAPVESASQLSARERRRARSERRETRSGAKNWREVVEERLMEKPKKQKGSWMDELNLDNLAKLGPQWWVIRVSRVKGNDIAQLLARSLAKNYPDMEFKIYAPSVNVKRRLKNGSYSVKPKQLFPGCVFLRCVMNKELHDFIREYDGVGGFLGSKVGNTKRQINRPKPVSAEDMEAIFRQAKEEQEKTDQAFEQEEKKAALDSGIRNTELEPDDILNAIVDYKSKRGSRKASNQVKATDASSTRINYKLLVPGSTVRVLSGTFSGFTGTLKKLNRKTKLATVHFTLFGKENIADIDANEIAIETN* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0910 344 SUPERFAMILY Translation proteins SH3-like domain 290 339 IPR008991 -
Gso1g0910 344 SMART nusgn_4 104 220 IPR006645 GO:0140673
Gso1g0910 344 PANTHER RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG 31 341 IPR043425 -
Gso1g0910 344 MobiDBLite consensus disorder prediction 36 69 - -
Gso1g0910 344 PANTHER TRANSCRIPTION ANTITERMINATION PROTEIN RFAH 31 341 - -
Gso1g0910 344 Gene3D - 290 340 IPR014722 -
Gso1g0910 344 SUPERFAMILY N-utilization substance G protein NusG, N-terminal domain 105 222 IPR036735 GO:0006355
Gso1g0910 344 Pfam KOW motif 291 322 IPR005824 -
Gso1g0910 344 CDD NGN_plant 106 217 - -
Gso1g0910 344 CDD KOW_NusG 289 339 - -
Gso1g0910 344 Gene3D - 105 222 IPR036735 GO:0006355
Gso1g0910 344 Coils Coil 217 237 - -
Gso1g0910 344 Pfam Transcription termination factor nusG 106 216 IPR006645 GO:0140673
Gso1g0910 344 MobiDBLite consensus disorder prediction 50 69 - -
Gso1g0910 344 SMART kow_9 288 315 IPR005824 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0910 - - gmx:100815839 650.973