Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0875 ATGGAGGCTTACACTAAGGTTTTTGGCATTCTTGGCCTTCTAGTATTTGTGAGCATTTCAGAGATTCATAGAGTGGAGGGTGCAGGGGAATGTGGGAGGTCTACTACTCCAGATAATGAAGCAATAAAGCTTATTCCTTGTGTCTCTGCAGCAAAAGATGAAAAGGCTGAAGTTACTCAGAATTGTTGTACTCAGATCGAGAAACTAGGCAAGAACCCTAGTTGTCTATGTGCTGTTATGCTCTCCAACACAGCCAAAATGTCTGGAGCTGACCCTAAGGTTGCCATAACAATCCCAAAACGCTGCAACCTTGCTAATCGCCCTATTGGTTACAAGTGTGGACCTTACACTCTTCCTTAA 360 0.4361 MEAYTKVFGILGLLVFVSISEIHRVEGAGECGRSTTPDNEAIKLIPCVSAAKDEKAEVTQNCCTQIEKLGKNPSCLCAVMLSNTAKMSGADPKVAITIPKRCNLANRPIGYKCGPYTLP* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0875 119 Pfam Probable lipid transfer 39 109 IPR016140 -
Gso1g0875 119 PANTHER LIPID TRANSFER PROTEIN 6 119 - -
Gso1g0875 119 PANTHER LIPID BINDING PROTEIN-RELATED 6 119 IPR039265 GO:0005504|GO:0009627
Gso1g0875 119 SMART aai_6 31 113 IPR016140 -
Gso1g0875 119 CDD AAI_LTSS 44 104 - -
Gso1g0875 119 Gene3D - 30 109 IPR036312 -
Gso1g0875 119 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 40 108 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0875 Gso-Chr1 35553064 35564254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0875 25 119 Acyl Lipid Metabolism Gene Families AT3G53980 67.368 3.33e-45 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0875 - - gmx:100306273 221.09