Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0855 ATGTCGAACGATATTGGATTCTTCGACCTCAACACGGGCGCCAAGATCCCTTCCGTCGGCTTGGGAACATGGCAGTCCGATCCTGGCCTCGTCGCTCAAGCCGTCGCTGCGGCCATCAAGGTTGGTTACCGCCACATTGATTGTGCTCAAATCTATGGCAATGAGAAAGAGATTGGCTCTATGTTGAAGAAGCTGTTTGAGGAGGGTGTAGTGAAGCGTGAGGATTTGTGGATTACATCTAAACTATGGAATACTGATCATGCTCCAGAAGACGTACCACTGGCATTGGACAGGACCTTGAAAGATTTGCAGCTTGATTATGTAGATTTGTATCTTATCCACTGGCCGACTTCAATGAAGAAAGGATCAGTTGGCTTTAATCCTGAAAATCTTGTGCAACCAAACATACCTAACACATGGAAGGCAATGGAAGCACTCTATGACTCCGGCAAGGCTCGGGCTATAGGTGTAAGCAATTTTTCCACCAAGAAGCTGGCAGATTTGCTGGCAATTGCTCGTGTTCCTCCTGCTGTCAACCAGGTGGAGTGTCATCCTTCATGGCAGCAGGACAAGCTGCAGGCTTTCTGCAATTCCAAAGGAGTCCACCTCACTGGATATTCACCTTTGGGTTCCCCTGGAACAACCTATTTTAAAAGTGATGTCCTTAAGCACCCAATTATAAATATGGTTGCGGAGAAACTAGGCAAGACTCCTGCACAAGTAGCTCTTCGCTGGGGACTGCAAATGGGCCATAGTGTTCTTCCCAAGAGTACTAACGAAACACGGATAAAGGAAAATTTTGATGTTTCTGGCTGGTCTATACCTGAGGACTTCCTTGCTAAATTTTCTGAGATTCAACAGGCAAGATTACTCAGGGGTACCACATTTGTCCATGAAACTTACGGTGCCTACAAATCTGTCGAGGAATTATGGGATGGTGAAATCTAA 948 0.462 MSNDIGFFDLNTGAKIPSVGLGTWQSDPGLVAQAVAAAIKVGYRHIDCAQIYGNEKEIGSMLKKLFEEGVVKREDLWITSKLWNTDHAPEDVPLALDRTLKDLQLDYVDLYLIHWPTSMKKGSVGFNPENLVQPNIPNTWKAMEALYDSGKARAIGVSNFSTKKLADLLAIARVPPAVNQVECHPSWQQDKLQAFCNSKGVHLTGYSPLGSPGTTYFKSDVLKHPIINMVAEKLGKTPAQVALRWGLQMGHSVLPKSTNETRIKENFDVSGWSIPEDFLAKFSEIQQARLLRGTTFVHETYGAYKSVEELWDGEI* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0855 315 ProSitePatterns Aldo/keto reductase family putative active site signature. 254 269 IPR018170 GO:0016491
Gso1g0855 315 SUPERFAMILY NAD(P)-linked oxidoreductase 10 288 IPR036812 -
Gso1g0855 315 ProSitePatterns Aldo/keto reductase family signature 1. 42 59 IPR018170 GO:0016491
Gso1g0855 315 CDD AKR_AKR4C1-15 6 292 IPR044498 GO:0016491
Gso1g0855 315 Pfam Aldo/keto reductase family 19 285 IPR023210 -
Gso1g0855 315 PANTHER ALDO/KETO REDUCTASE 3 314 - -
Gso1g0855 315 PIRSF AKR 1 309 IPR020471 GO:0016491
Gso1g0855 315 Gene3D - 5 315 IPR036812 -
Gso1g0855 315 PANTHER ALDO-KETO REDUCTASE FAMILY 4 MEMBER C9-LIKE 3 314 - -
Gso1g0855 315 ProSitePatterns Aldo/keto reductase family signature 2. 143 160 IPR018170 GO:0016491
Gso1g0855 315 PRINTS Aldo-keto reductase signature 38 62 IPR020471 GO:0016491
Gso1g0855 315 PRINTS Aldo-keto reductase signature 98 116 IPR020471 GO:0016491
Gso1g0855 315 PRINTS Aldo-keto reductase signature 143 160 IPR020471 GO:0016491
Gso1g0855 315 PRINTS Aldo-keto reductase signature 177 206 IPR020471 GO:0016491
Gso1g0855 315 PRINTS Aldo-keto reductase signature 221 245 IPR020471 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0855 Gso-Chr1 34207755 34212963 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0855 K00002 - gmx:100802323 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1679 18 48902182 48905422 Gso1g0855 1 34207755 34212963 PCT
Gso9g2318 9 47444281 47447406 Gso1g0855 1 34207755 34212963 PCT